RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 RNF223E7ERA6 249 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 NDUFS8O00217 210 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 BHLHE40O14503 412 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 SOCS2O14508 198 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 SYNGR3O43761 229 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 PPP1R3DO95685 299 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 GAAP10253 952 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 SLC25A16P16260 332 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 UCP2P55851 309 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 SGCAQ16586 387 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 ZBTB46Q86UZ6 589 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 GLB1L2Q8IW92 636 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 C1orf174Q8IYL3 243 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 RHNO1Q9BSD3 238 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 RACGAP1Q9H0H5 632 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 ATPIF1Q9UII2 106 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 TIMM10BQ9Y5J6 103 aa17.03■□□□□ 0.32
CLTA-202ENST00000345519 MALRD1Q5VYJ5 2156 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 A0A1W2PPL8 197 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 C12orf71A8MTZ7 269 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 DCTN6O00399 190 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 GYG2O15488 501 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 CCL2P13500 99 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 APLNRP35414 380 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 WNT5AP41221 380 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 GUCA1AP43080 201 aaPredicted RBP17.02■□□□□ 0.32
CLTA-202ENST00000345519 HSF2Q03933 536 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 LOXL1Q08397 574 aaPredicted RBP17.02■□□□□ 0.32
CLTA-202ENST00000345519 AQP6Q13520 282 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 MICAQ29983 383 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 RASSF6Q6ZTQ3 369 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 NEU4Q8WWR8 484 aaPredicted RBP17.02■□□□□ 0.32
CLTA-202ENST00000345519 FAM168AQ92567 244 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 SAMD8Q96LT4 415 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 ERMAPQ96PL5 475 aaPredicted RBP17.02■□□□□ 0.32
CLTA-202ENST00000345519 DDOQ99489 341 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 NUAK2Q9H093 628 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 LRMDAQ9H2I8 198 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 CDH20Q9HBT6 801 aa17.02■□□□□ 0.32
CLTA-202ENST00000345519 MYEF2Q9P2K5 600 aaKnown RBP17.02■□□□□ 0.32
CLTA-202ENST00000345519 TCRBV3S1A0A5B6 114 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 H3BSA7 217 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 SLC16A7O60669 478 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 KHDRBS3O75525 346 aaKnown RBP17.01■□□□□ 0.31
CLTA-202ENST00000345519 LY6HO94772 140 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 TP53P04637 393 aaPredicted RBP17.01■□□□□ 0.31
CLTA-202ENST00000345519 HIST1H1CP16403 213 aaKnown RBP17.01■□□□□ 0.31
CLTA-202ENST00000345519 HOXB4P17483 251 aaPredicted RBP17.01■□□□□ 0.31
CLTA-202ENST00000345519 CRABP1P29762 137 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 RAD52P43351 418 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 RGS7BPQ6MZT1 257 aaPredicted RBP17.01■□□□□ 0.31
CLTA-202ENST00000345519 UGT2A3Q6UWM9 527 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 CD300LDQ6UXZ3 194 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 LRP11Q86VZ4 500 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 ALDH16A1Q8IZ83 802 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 ZNF101Q8IZC7 436 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 PAPD5Q8NDF8 572 aaKnown RBP17.01■□□□□ 0.31
CLTA-202ENST00000345519 AKR7LQ8NHP1 331 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 CANT1Q8WVQ1 401 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 LRGUKQ96M69 825 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 PLA2G12AQ9BZM1 189 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 RAB1BQ9H0U4 201 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 REEP1Q9H902 201 aa17.01■□□□□ 0.31
CLTA-202ENST00000345519 SONP18583 2426 aaKnown RBP17■□□□□ 0.31
CLTA-202ENST00000345519 LOC390937A0A1W2PQ73 354 aa17■□□□□ 0.31
CLTA-202ENST00000345519 DHRS12A0PJE2 317 aa17■□□□□ 0.31
CLTA-202ENST00000345519 M0R233 179 aa17■□□□□ 0.31
CLTA-202ENST00000345519 SMAD7O15105 426 aaKnown RBP17■□□□□ 0.31
CLTA-202ENST00000345519 DNAJC8O75937 253 aaPredicted RBP17■□□□□ 0.31
CLTA-202ENST00000345519 CCNB2O95067 398 aa17■□□□□ 0.31
CLTA-202ENST00000345519 GASTP01350 101 aa17■□□□□ 0.31
CLTA-202ENST00000345519 GIFP27352 417 aa17■□□□□ 0.31
CLTA-202ENST00000345519 HIST1H3AP68431 136 aa17■□□□□ 0.31
CLTA-202ENST00000345519 SCRN3Q0VDG4 424 aa17■□□□□ 0.31
CLTA-202ENST00000345519 KRTAP21-3Q3LHN1 58 aa17■□□□□ 0.31
CLTA-202ENST00000345519 ZNF362Q5T0B9 420 aaPredicted RBP17■□□□□ 0.31
CLTA-202ENST00000345519 HIST2H3PS2Q5TEC6 136 aa17■□□□□ 0.31
CLTA-202ENST00000345519 DNM1P34Q6PK57 102 aa17■□□□□ 0.31
CLTA-202ENST00000345519 HIST2H3AQ71DI3 136 aa17■□□□□ 0.31
CLTA-202ENST00000345519 NPEPL1Q8NDH3 523 aa17■□□□□ 0.31
CLTA-202ENST00000345519 OR8D4Q8NGM9 314 aa17■□□□□ 0.31
CLTA-202ENST00000345519 CHID1Q9BWS9 393 aa17■□□□□ 0.31
CLTA-202ENST00000345519 MS4A5Q9H3V2 200 aa17■□□□□ 0.31
CLTA-202ENST00000345519 EGLN3Q9H6Z9 239 aa17■□□□□ 0.31
CLTA-202ENST00000345519 EMC7Q9NPA0 242 aa17■□□□□ 0.31
CLTA-202ENST00000345519 NDRG4Q9ULP0 352 aaKnown RBP17■□□□□ 0.31
CLTA-202ENST00000345519 POMPQ9Y244 141 aa17■□□□□ 0.31
CLTA-202ENST00000345519 COA3Q9Y2R0 106 aaPredicted RBP17■□□□□ 0.31
CLTA-202ENST00000345519 SAMHD1Q9Y3Z3 626 aaKnown RBP17■□□□□ 0.31
CLTA-202ENST00000345519 OR6C6A6NF89 314 aa16.99■□□□□ 0.31
CLTA-202ENST00000345519 IGHV3-13P01766 116 aa16.99■□□□□ 0.31
CLTA-202ENST00000345519 FAM157BP0CG42 384 aa16.99■□□□□ 0.31
CLTA-202ENST00000345519 PDLIM4P50479 330 aa16.99■□□□□ 0.31
CLTA-202ENST00000345519 ZNF774Q6NX45 483 aa16.99■□□□□ 0.31
CLTA-202ENST00000345519 VASH1Q7L8A9 365 aaPredicted RBP16.99■□□□□ 0.31
CLTA-202ENST00000345519 OR6V1Q8N148 313 aa16.99■□□□□ 0.31
CLTA-202ENST00000345519 LNX2Q8N448 690 aa16.99■□□□□ 0.31
CLTA-202ENST00000345519 AQP11Q8NBQ7 271 aa16.99■□□□□ 0.31
CLTA-202ENST00000345519 SLC26A10Q8NG04 563 aa16.99■□□□□ 0.31
CLTA-202ENST00000345519 MARS2Q96GW9 593 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms