RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PTHLHP12272 177 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ATF1P18846 271 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 LIM2P55344 173 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 GKN2Q86XP6 184 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 LINC00518Q8N0U6 118 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF383Q8NA42 475 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 VAMP8Q9BV40 100 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 CXCL16Q9H2A7 254 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 PLAC1Q9HBJ0 212 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 NSG2Q9Y328 171 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 hCG_1809904A0A1W2PP81 198 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 A0A1W2PR64 198 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 A0A1W2PRV1 198 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 PLA2G10O15496 165 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 CNMDO75829 334 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 DDAH2O95865 285 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 GABRA1P14867 456 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 HIST1H1CP16403 213 aaKnown RBP11.09□□□□□ -0.63
COL12A1-202ENST00000345356 RAB5AP20339 215 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 HNRNPA3P51991 378 aaKnown RBP11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ZP2Q05996 745 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 C1orf61Q13536 156 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 MLC1Q15049 377 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 TOMM20LQ6UXN7 152 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ISG20Q96AZ6 181 aaKnown RBP11.09□□□□□ -0.63
COL12A1-202ENST00000345356 PHYHIPLQ96FC7 376 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 NUMA1Q14980 2115 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 PLPP1O14494 284 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 NPPBP16860 134 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ENDOGQ14249 297 aaKnown RBP11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF273Q14593 569 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ETFDHQ16134 617 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 DIO2Q92813 273 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 SMIM7Q9BQ49 75 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 WWTR1Q9GZV5 400 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 OR5K4A6NMS3 321 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 SEC14L6B5MCN3 397 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 G3V3Q6 166 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 M0R143 59 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ANGPTL7O43827 346 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 VIPR2P41587 438 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 KRTDAPP60985 99 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ELFN2Q5R3F8 820 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 MFSD12Q6NUT3 480 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 GTF2H5Q6ZYL4 71 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF761Q86XN6 746 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-202ENST00000345356 SIRT6Q8N6T7 355 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ZC3HAV1LQ96H79 300 aaKnown RBP11.09□□□□□ -0.63
COL12A1-202ENST00000345356 NUDT22Q9BRQ3 303 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 N4BP2Q86UW6 1770 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-202ENST00000345356 APBB3O95704 486 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 MOB3CQ70IA8 216 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 ZNF429Q86V71 674 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 HSD17B8Q92506 261 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 PTP4A1Q93096 173 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 GPR137Q96N19 417 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 VN1R3Q9BXE9 311 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 KLF16Q9BXK1 252 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-202ENST00000345356 DUSP22Q9NRW4 184 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 UQCC1Q9NVA1 299 aa11.09□□□□□ -0.63
COL12A1-202ENST00000345356 RNF212BA8MTL3 300 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 ZBTB42B2RXF5 422 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 OR1D4P47884 311 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF626Q68DY1 528 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 SEZ6L2Q6UXD5 910 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 MRPL21Q7Z2W9 205 aaKnown RBP11.08□□□□□ -0.64
COL12A1-202ENST00000345356 PLA2G12AQ9BZM1 189 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 FKRPQ9H9S5 495 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 PADI1Q9ULC6 663 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 UPK1AO00322 258 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 SDCBPO00560 298 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF90Q03938 601 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 NCR3LG1Q68D85 454 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 TMPPEQ6ZT21 453 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 MSRB3Q8IXL7 192 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 OR2L13Q8N349 312 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 SEH1LQ96EE3 360 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 SLC23A2Q9UGH3 650 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 MED16Q9Y2X0 877 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 SERINC4A6NH21 518 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 RAB27BO00194 218 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF264O43296 627 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 SYNGR4O95473 234 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 IGHG1P01857 330 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 ZNF25P17030 456 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-202ENST00000345356 ABCD3P28288 659 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 CSNK1A1P48729 337 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 CARD18P57730 90 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 B3GNTL1Q67FW5 361 aaPredicted RBP11.08□□□□□ -0.64
COL12A1-202ENST00000345356 WDR88Q6ZMY6 472 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 OR5K2Q8NHB8 316 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 EDEM2Q9BV94 578 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 HEPACAM2A8MVW5 462 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 PRSS23O95084 383 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 CHRM4P08173 479 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 DIO1P49895 249 aa11.08□□□□□ -0.64
COL12A1-202ENST00000345356 IKZF1Q13422 519 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms