RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 NRIP3Q9NQ35 241 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 FBXO8Q9NRD0 319 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 SEMA4GQ9NTN9 838 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 OR52A1Q9UKL2 312 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 J3KRW8 73 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 MYF5P13349 255 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 ZNF511Q8NB15 262 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 COA3Q9Y2R0 106 aaPredicted RBP13.81□□□□□ -0.2
CUL3-202ENST00000344951 SUB1P53999 127 aaKnown RBP eCLIP13.81□□□□□ -0.25e-7■■■■■ 33
CUL3-202ENST00000344951 IAH1Q2TAA2 248 aaPredicted RBP13.81□□□□□ -0.2
CUL3-202ENST00000344951 MOB3BQ86TA1 216 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 WDR5BQ86VZ2 330 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 C11orf40Q8WZ69 217 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 ROBO4Q8WZ75 1007 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 ZNF416Q9BWM5 594 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 LHX3Q9UBR4 397 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 BLACEA4D250 179 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 F5H697 171 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 CYTIPO60759 359 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 RGS11O94810 467 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 RRASP10301 218 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 CPEP16870 476 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 GLRA1P23415 457 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 MTNR1BP49286 362 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 PPIAP62937 165 aaKnown RBP13.81□□□□□ -0.2
CUL3-202ENST00000344951 C17orf107Q6ZR85 190 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 ISL2Q96A47 359 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 CCDC74BQ96LY2 380 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 PSD2Q9BQI7 771 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 KCNG2Q9UJ96 466 aa13.81□□□□□ -0.2
CUL3-202ENST00000344951 A0A1B0GTW7 788 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 RAB19A4D1S5 217 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 OPRD1P41143 372 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 GPR12P47775 334 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 RAB38P57729 211 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 CTU2Q2VPK5 515 aaKnown RBP13.8□□□□□ -0.2
CUL3-202ENST00000344951 SPATA46Q5T0L3 261 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 LRFN3Q9BTN0 628 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 SPHK1Q9NYA1 384 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 SERINC4A6NH21 518 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 TGFBR1P36897 503 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 CEBPDP49716 269 aaPredicted RBP13.8□□□□□ -0.2
CUL3-202ENST00000344951 TRA2BP62995 288 aaKnown RBP13.8□□□□□ -0.2
CUL3-202ENST00000344951 GLCCI1Q86VQ1 547 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 CXorf67Q86X51 503 aaPredicted RBP13.8□□□□□ -0.2
CUL3-202ENST00000344951 LRRC56Q8IYG6 542 aaPredicted RBP13.8□□□□□ -0.2
CUL3-202ENST00000344951 SLC24A4Q8NFF2 622 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 MRPS24Q96EL2 167 aaKnown RBP13.8□□□□□ -0.2
CUL3-202ENST00000344951 C14orf79Q96F83 325 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 SOX7Q9BT81 388 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 CCL26Q9Y258 94 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 C5P01031 1676 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 YOD1Q5VVQ6 348 aaPredicted RBP13.8□□□□□ -0.2
CUL3-202ENST00000344951 LCN15Q6UWW0 184 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 PLXDC2Q6UX71 529 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 HIST2H3AQ71DI3 136 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 SEC22CQ9BRL7 303 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 SRRQ9GZT4 340 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 RGPD2P0DJD1 1756 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 EDIL3O43854 480 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 PRLHRP49683 370 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 GGTA1PQ4G0N0 100 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 SOWAHCQ53LP3 525 aaPredicted RBP13.8□□□□□ -0.2
CUL3-202ENST00000344951 LRRTM1Q86UE6 522 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 MOB3AQ96BX8 217 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 SPACA5Q96QH8 159 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 M0QZ24 198 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 TNFSF11O14788 317 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 MRPL19P49406 292 aaKnown RBP13.8□□□□□ -0.2
CUL3-202ENST00000344951 TNFRSF17Q02223 184 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 TMEM106AQ96A25 262 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 SLCO5A1Q9H2Y9 848 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 C12orf10Q9HB07 376 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 CSNK1G1Q9HCP0 422 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 WSB2Q9NYS7 404 aaPredicted RBP13.8□□□□□ -0.2
CUL3-202ENST00000344951 PADI1Q9ULC6 663 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 A0A087WV62 115 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 A0A087WZY1 265 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 GP2P55259 537 aaKnown RBP13.8□□□□□ -0.2
CUL3-202ENST00000344951 ZNF90Q03938 601 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 PAQR9Q6ZVX9 377 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 TMEM231Q9H6L2 316 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 MSL2Q9HCI7 577 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 SLC22A7Q9Y694 548 aa13.8□□□□□ -0.2
CUL3-202ENST00000344951 TAPBPO15533 448 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 SLC25A6P12236 298 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 KIAA1024LP59773 190 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 KDM4DQ6B0I6 523 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 MFSD9Q8NBP5 474 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 KCTD12Q96CX2 325 aaKnown RBP13.79□□□□□ -0.2
CUL3-202ENST00000344951 A0A1W2PRD5 423 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 A0A1W2PRF3 423 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 A0A1W2PRM7 423 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 S100A4P26447 101 aaKnown RBP13.79□□□□□ -0.2
CUL3-202ENST00000344951 SOHLH1Q5JUK2 328 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 ANGPTL5Q86XS5 388 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 MED30Q96HR3 178 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 NIPSNAP3BQ9BS92 247 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 AMTP48728 403 aa13.79□□□□□ -0.2
CUL3-202ENST00000344951 ZNF816Q0VGE8 651 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms