RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 RPS6KA6Q9UK32 745 aa10.61□□□□□ -0.71
SGCA-202ENST00000344627 A0A087WUU8 490 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 C12orf71A8MTZ7 269 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 FFAR1O14842 300 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 SPRY3O43610 288 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 NCR1O76036 304 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 IGHMP01871 453 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 SLC9A3P48764 834 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 PSME3P61289 254 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 PCBD1P61457 104 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 SRSF2Q01130 221 aaKnown RBP10.6□□□□□ -0.71
SGCA-202ENST00000344627 ZBED5Q49AG3 693 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 FGD3Q5JSP0 725 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 RINLQ6ZS11 566 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 CLDND2Q8NHS1 167 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 GTF3AQ92664 365 aaKnown RBP10.6□□□□□ -0.71
SGCA-202ENST00000344627 NMD3Q96D46 503 aaKnown RBP10.6□□□□□ -0.71
SGCA-202ENST00000344627 RAB39BQ96DA2 213 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 HIF1ANQ9NWT6 349 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 TIMM10BQ9Y5J6 103 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 ENPP4Q9Y6X5 453 aa10.6□□□□□ -0.71
SGCA-202ENST00000344627 IGLV3-9A0A075B6K5 115 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 LOC100509620A0A075B734 347 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 PLSCR5A0PG75 271 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 TRIM77I1YAP6 450 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 J3QLI3 93 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 H1F0P07305 194 aaKnown RBP10.59□□□□□ -0.71
SGCA-202ENST00000344627 CD14P08571 375 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 CST2P09228 141 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 ITGA2P17301 1181 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 MSR1P21757 451 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 LIPAP38571 399 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 ZNF81P51508 661 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 ARHGDIAP52565 204 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 MVKQ03426 396 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 KRT72Q14CN4 511 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 ANKDD1AQ495B1 522 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 AVPI1Q5T686 147 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 FAM27BQ5VT28 67 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 GLYATQ6IB77 296 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 ACSM5Q6NUN0 579 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 ZNF774Q6NX45 483 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 HACD2Q6Y1H2 254 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 LRRC75AQ8NAA5 344 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 SGMS2Q8NHU3 365 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 ABHD4Q8TB40 342 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 SLC25A40Q8TBP6 338 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 FAM46AQ96IP4 442 aaKnown RBP10.59□□□□□ -0.71
SGCA-202ENST00000344627 POM121L2Q96KW2 1035 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 Q96M85 177 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 ZNF570Q96NI8 536 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 RBM4Q9BWF3 364 aaKnown RBP10.59□□□□□ -0.71
SGCA-202ENST00000344627 OR2H1Q9GZK4 316 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 WNT5BQ9H1J7 359 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 NMNAT1Q9HAN9 279 aaPredicted RBP10.59□□□□□ -0.71
SGCA-202ENST00000344627 EMC7Q9NPA0 242 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 CGGBP1Q9UFW8 167 aaPredicted RBP10.59□□□□□ -0.71
SGCA-202ENST00000344627 TMEM5Q9Y2B1 443 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 ADAM18Q9Y3Q7 739 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 V9GYQ6 96 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 WNK2Q9Y3S1 2297 aa10.59□□□□□ -0.71
SGCA-202ENST00000344627 IGHV1-69-2A0A0G2JMI3 117 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 CDC42EP2O14613 210 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 WNT9BO14905 357 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 PNPP00491 289 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 IGHV3-13P01766 116 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 GAAP10253 952 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 MPV17P39210 176 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 WNT5AP41221 380 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 HTR5AP47898 357 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 CENPAP49450 140 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 PPP1CBP62140 327 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 SLC3A1Q07837 685 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 C8orf82Q6P1X6 216 aaPredicted RBP10.58□□□□□ -0.72
SGCA-202ENST00000344627 ARL9Q6T311 187 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 TMPRSS11FQ6ZWK6 438 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 USP51Q70EK9 711 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 ZNF771Q7L3S4 317 aaPredicted RBP10.58□□□□□ -0.72
SGCA-202ENST00000344627 CPLX4Q7Z7G2 160 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 ZNF101Q8IZC7 436 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 RNF148Q8N7C7 305 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 FAM216AQ8WUB2 273 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 IPCEF1Q8WWN9 437 aaPredicted RBP10.58□□□□□ -0.72
SGCA-202ENST00000344627 TIMD4Q96H15 378 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 OR2J1Q9GZK6 312 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 NSRP1Q9H0G5 558 aaKnown RBP10.58□□□□□ -0.72
SGCA-202ENST00000344627 METTL17Q9H7H0 456 aaPredicted RBP10.58□□□□□ -0.72
SGCA-202ENST00000344627 SAP30LQ9HAJ7 183 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 ELOVL3Q9HB03 270 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 KRCC1Q9NPI7 259 aaPredicted RBP10.58□□□□□ -0.72
SGCA-202ENST00000344627 PCDHB10Q9UN67 800 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 AURKCQ9UQB9 309 aa10.58□□□□□ -0.72
SGCA-202ENST00000344627 A0A0G2JMP0 313 aa10.57□□□□□ -0.72
SGCA-202ENST00000344627 TEX13CA0A0J9YWL9 993 aa10.57□□□□□ -0.72
SGCA-202ENST00000344627 A0A0X1KG70 313 aa10.57□□□□□ -0.72
SGCA-202ENST00000344627 FAM157AC9JC47 383 aa10.57□□□□□ -0.72
SGCA-202ENST00000344627 CLDN25C9JDP6 229 aa10.57□□□□□ -0.72
SGCA-202ENST00000344627 H3BSA7 217 aa10.57□□□□□ -0.72
SGCA-202ENST00000344627 SOCS2O14508 198 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms