RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TMEM127O75204 238 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 FOXK1P85037 733 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 HSF1Q00613 529 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 ACY1Q03154 408 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 GLYATL3Q5SZD4 288 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 SLC26A10Q8NG04 563 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 OR10G3Q8NGC4 313 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 OR4C16Q8NGL9 310 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 OR1J4Q8NGS1 313 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 ST8SIA1Q92185 356 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 HLA-CQ95604 372 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 GPR137Q96N19 417 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 AKIRIN1Q9H9L7 192 aaPredicted RBP13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 CA10Q9NS85 328 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 PPP4R1LQ9P1A2 415 aa13.33□□□□□ -0.27
VIPAS39-202ENST00000343765 CPAMD8Q8IZJ3 1885 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 LOC100289279A0A1B0GTE1 492 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 TMEM272A0A1B0GTI8 110 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 A0A1B0GUH1 482 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 LOC107986453A0A1B0GWG9 222 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 PYCARD-AS1I3L0S3 204 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 SLC17A2O00624 439 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 LDOC1O95751 146 aaPredicted RBP13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 TGM6O95932 706 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 RLN1P04808 185 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 CD2P06729 351 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 GTF2F2P13984 249 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 DNASE1L1P49184 302 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 PER3P56645 1201 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 DCDP81605 110 aaKnown RBP13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 ZNF782Q6ZMW2 699 aaPredicted RBP13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 BPHLQ86WA6 291 aaPredicted RBP13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 JAGN1Q8N5M9 183 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 MEIOBQ8N635 442 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 PCNPQ8WW12 178 aaKnown RBP13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 CRB3Q9BUF7 120 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 ZMAT3Q9HA38 289 aaKnown RBP13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 SCP2D1Q9UJQ7 156 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 RARRES3Q9UL19 164 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 ADAMTS20P59510 1910 aa13.33□□□□□ -0.28
VIPAS39-202ENST00000343765 VSTM2BA6NLU5 285 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 SIGLEC6O43699 453 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 PRAF2O60831 178 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 OR2J2O76002 312 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 DAP3P51398 398 aaKnown RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 BIDP55957 195 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 LGALSLQ3ZCW2 172 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 OR10K2Q6IF99 312 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 ZNF627Q7L945 461 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 UXS1Q8NBZ7 420 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 HGDQ93099 445 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 DDIT4LQ96D03 193 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 WDR77Q9BQA1 342 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 GINS4Q9BRT9 223 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 DPCDQ9BVM2 203 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 METTL7AQ9H8H3 244 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 CHST11Q9NPF2 352 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 R4GMQ9 66 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 IGHV5-10-1A0A0J9YXX1 117 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 TMEM269A0A1B0GVZ9 245 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 H7C417 338 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 P2RY10O00398 339 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 APOBEC1P41238 236 aaKnown RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 ZBTB37Q5TC79 503 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 TMEM205Q6UW68 189 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 GLDNQ6ZMI3 551 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 OR8H3Q8N146 312 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 MFSD8Q8NHS3 518 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 C15orf40Q8WUR7 153 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 WDR89Q96FK6 387 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 CCDC74BQ96LY2 380 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 MTFP1Q9UDX5 166 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 OR52A1Q9UKL2 312 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 IGLV3-12A0A075B6K2 115 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 A6NIZ1 184 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 EFNA2O43921 213 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 ICMTO60725 284 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 NDUFB6O95139 128 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 EPHA8P29322 1005 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 MNDAP41218 407 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 ZNF41P51814 821 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 UBE2MP61081 183 aaKnown RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 RAP1BP61224 184 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 RAP1AP62834 184 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 NR0B2Q15466 257 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 LYSMD4Q5XG99 296 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 C5orf46Q6UWT4 87 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 FTMTQ8N4E7 242 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 CMKLR1Q99788 373 aa13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 ZNF275Q9NSD4 429 aaPredicted RBP13.32□□□□□ -0.28
VIPAS39-202ENST00000343765 CIB4A0PJX0 185 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 CREBL2O60519 120 aaPredicted RBP13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 HTR2CP28335 458 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 TSPAN5P62079 268 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 PHF19Q5T6S3 580 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 GLT8D1Q68CQ7 371 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 DNM1P34Q6PK57 102 aa13.31□□□□□ -0.28
VIPAS39-202ENST00000343765 TEX261Q6UWH6 196 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms