RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 AMMECR1LQ6DCA0 310 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 AGTRAPQ6RW13 159 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 PPTC7Q8NI37 304 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 KCNJ15Q99712 375 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 TMEM191AQ9H0A3 160 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 EGLN3Q9H6Z9 239 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 TRAPPC2LH3BP13 241 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 AKR7A2O43488 359 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 LRP3O75074 770 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 CBX7O95931 251 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 GRM5P41594 1212 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 LHX4Q969G2 390 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 P4HTMQ9NXG6 502 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 PXDNQ92626 1479 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 TCRBV7S3A2A0A539 114 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 AQP7P3A6NL99 342 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 SIGLEC5O15389 551 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 HNRNPA1P09651 372 aaKnown RBP eCLIP5.7□□□□□ -1.5
VCAN-203ENST00000343200 OR2T7P0C7T2 308 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 RPS12P25398 132 aaKnown RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 SULT1A1P50225 295 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 PLGLB1Q02325 96 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 SRSF9Q13242 221 aaKnown RBP eCLIP5.7□□□□□ -1.5
VCAN-203ENST00000343200 HNRNPA1L2Q32P51 320 aaKnown RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 OR10A7Q8NGE5 316 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 OR4B1Q8NGF8 309 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 PPP1R1CQ8WVI7 109 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 ZNF426Q9BUY5 554 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 SPANXA1Q9NS26 97 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 GALPQ9UBC7 116 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 AMDHD2Q9Y303 409 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 CSNK1G3Q9Y6M4 447 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 CSO75390 466 aaKnown RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 KLF7O75840 302 aaPredicted RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 C4BPAP04003 597 aaKnown RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 RPA2P15927 270 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 CTSSP25774 331 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 ACRV1P26436 265 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 RPS15AP62244 130 aaKnown RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 TEX30Q5JUR7 227 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 HES3Q5TGS1 186 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 MRPL21Q7Z2W9 205 aaKnown RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 GPR137CQ8N3F9 429 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 BCL2L2Q92843 193 aaPredicted RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 FAM3DQ96BQ1 224 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 ATG4CQ96DT6 458 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 DMRTA2Q96SC8 542 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 FKBP11Q9NYL4 201 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 SLC7A7Q9UM01 511 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 OR1A2Q9Y585 309 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 HS3ST4Q9Y661 456 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 TCF20Q9UGU0 1960 aaKnown RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 ASGR2P07307 311 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 GHRHRQ02643 423 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 TP53I3Q53FA7 332 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 NHSL2Q5HYW2 709 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 RIPPLY2Q5TAB7 128 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 BAP18Q8IXM2 172 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 MMABQ96EY8 250 aaPredicted RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 PSMG3Q9BT73 122 aaPredicted RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 MTHFD2LQ9H903 347 aaPredicted RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 KLF15Q9UIH9 416 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 GABRQQ9UN88 632 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 NRP1O14786 923 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 CTSLP07711 333 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 SQSTM1Q13501 440 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 LY6KQ17RY6 165 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 SLC16A12Q6ZSM3 486 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 LANCL2Q9NS86 450 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 IL36AQ9UHA7 158 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 YIPF1Q9Y548 306 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 PTGDR2Q9Y5Y4 395 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 FAM183AA6NL82 134 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 OR2J3O76001 311 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 CD1DP15813 335 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 FCGR2CP31995 323 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 BRS3P32247 399 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 AKR1C3P42330 323 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 TAS2R38P59533 333 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 LETMD1Q6P1Q0 360 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 FAHD2BQ6P2I3 314 aaPredicted RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 MAML2Q8IZL2 1156 aaPredicted RBP5.7□□□□□ -1.5
VCAN-203ENST00000343200 HUS1BQ8NHY5 278 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 FAHD2AQ96GK7 314 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 PIPOXQ9P0Z9 390 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 POMT2Q9UKY4 750 aa5.7□□□□□ -1.5
VCAN-203ENST00000343200 NUDT3O95989 172 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 OR4E1P0C645 316 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SEMA3BQ13214 749 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 VWA2Q5GFL6 755 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 IRF2BP1Q8IU81 584 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 TMEM37Q8WXS4 190 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 HRASLS5Q96KN8 279 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 COL25A1Q9BXS0 654 aaPredicted RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 LOC730098B7Z3J9 87 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 EDN3P14138 238 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 CD200P41217 278 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 CNN1P51911 297 aaKnown RBP5.69□□□□□ -1.5
VCAN-203ENST00000343200 LIPNQ5VXI9 398 aa5.69□□□□□ -1.5
VCAN-203ENST00000343200 SAXO2Q658L1 398 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms