RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PLA2G10O15496 165 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 CX3CR1P49238 355 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 RHEBQ15382 184 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 PRICKLE4Q2TBC4 344 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 LINC00303Q3SY05 128 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ACTBL2Q562R1 376 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 CBLN3Q6UW01 205 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 CMTM1Q8IZ96 169 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 FBLIM1Q8WUP2 373 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 PIGCQ92535 297 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 METTL9Q9H1A3 318 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 DDAH2O95865 285 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 GDF1P27539 372 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 HTR5AP47898 357 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 PPP1CAP62136 330 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 DUSP2Q05923 314 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 EXOSC2Q13868 293 aaKnown RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 DOC2BQ14184 412 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 RPS19BP1Q86WX3 136 aaKnown RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 MKXQ8IYA7 352 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 NUDCD2Q8WVJ2 157 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 SLAMF6Q96DU3 332 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 TRMT61AQ96FX7 289 aaKnown RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 MICU1Q9BPX6 476 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 BANF2Q9H503 90 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ADGRL4Q9HBW9 690 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ACAD8Q9UKU7 415 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 A0A1W2PNR3 127 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 B8ZZF3 427 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 POU3F2P20265 443 aaPredicted RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 EGR3Q06889 387 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ACSM1Q08AH1 577 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ZNF79Q15937 498 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 C9orf135Q5VTT2 229 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ZNF695Q8IW36 515 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 FAM71CQ8NEG0 241 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 OR2AK2Q8NG84 335 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 OR52N5Q8NH56 324 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 OR51E1Q8TCB6 317 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 SCARB1Q8WTV0 552 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 SLC25A43Q8WUT9 341 aaPredicted RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 PIGTQ969N2 578 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 LRRC61Q9BV99 259 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 NUDT9Q9BW91 350 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 CHST11Q9NPF2 352 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 TAS2R5Q9NYW4 299 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 EML2O95834 649 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 SPTBP11277 2137 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 CD79AP11912 226 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 RPL35P42766 123 aaKnown RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 IAH1Q2TAA2 248 aaPredicted RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 RIF1Q5UIP0 2472 aaKnown RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 TMUB2Q71RG4 321 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ZAR1Q86SH2 424 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 SBF2Q86WG5 1849 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ZNF709Q8N972 641 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 C8orf44Q96CB5 159 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 PTDSS2Q9BVG9 487 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 TEX51A0A1B0GUA7 166 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 LOC102725191A0A1B0GVB3 256 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 LILRA5A6NI73 299 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 FTCDNL1E5RQL4 147 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 LMO7DNF2Z398 122 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 EIF1BO60739 113 aaKnown RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 SDHBP21912 280 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 KRBOX4Q5JUW0 171 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 RTL6Q6ICC9 239 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 HSD17B8Q92506 261 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 EDAQ92838 391 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 SGCZQ96LD1 299 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 OR8B4Q96RC9 309 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 CRISPLD2Q9H0B8 497 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 KCNJ16Q9NPI9 418 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 NXT1Q9UKK6 140 aaKnown RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 FER1L6Q2WGJ9 1857 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 CKAP5Q14008 2032 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 CNOT4O95628 575 aaKnown RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 FASLGP48023 281 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 EFNA3P52797 238 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 HYAL1Q12794 435 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 LPCAT3Q6P1A2 487 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 DUSP18Q8NEJ0 188 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 OR1M1Q8NGA1 313 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 OR4C16Q8NGL9 310 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 ST8SIA1Q92185 356 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 MED30Q96HR3 178 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 A0A1B0GTH9 108 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 SLC17A2O00624 439 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 SSX5O60225 188 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 PSG6Q00889 435 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 TMEM92Q6UXU6 159 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 WDR88Q6ZMY6 472 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 LIX1LQ8IVB5 337 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 DND1Q8IYX4 353 aaKnown RBP6.52□□□□□ -1.37
VCAN-202ENST00000342785 GJC3Q8NFK1 279 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 WBP1LQ9NX94 342 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 FLRT3Q9NZU0 649 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 B3GALT5Q9Y2C3 310 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 PCDHGA1Q9Y5H4 931 aa6.52□□□□□ -1.37
VCAN-202ENST00000342785 PTPRFP10586 1907 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms