RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SSR2P43308 183 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 SOX2P48431 317 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 SKP1P63208 163 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 TAF1CQ15572 869 aaPredicted RBP16.77■□□□□ 0.27
SMPD1-201ENST00000342245 PHF19Q5T6S3 580 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 Q6ZRG5 221 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 CCDC116Q8IYX3 515 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 PCBD2Q9H0N5 130 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 SLC23A2Q9UGH3 650 aa16.77■□□□□ 0.27
SMPD1-201ENST00000342245 PCYT1BQ9Y5K3 369 aaPredicted RBP16.77■□□□□ 0.27
SMPD1-201ENST00000342245 UMAD1C9J7I0 102 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 GLCEO94923 617 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 ZIC2O95409 532 aaPredicted RBP16.76■□□□□ 0.27
SMPD1-201ENST00000342245 SERPINA5P05154 406 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 HEXBP07686 556 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 LAMP2P13473 410 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 SNCAP37840 140 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 PBX2P40425 430 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 SLC9A5Q14940 896 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 TOMM34Q15785 309 aaPredicted RBP16.76■□□□□ 0.27
SMPD1-201ENST00000342245 MESTQ5EB52 335 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 HSD11B1LQ7Z5J1 315 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 UBE3DQ7Z6J8 389 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 ZNF584Q8IVC4 421 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 HIST3H2BBQ8N257 126 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 M1APQ8TC57 530 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 WBP2Q969T9 261 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 R3HDM4Q96D70 268 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 TGM7Q96PF1 710 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 FARSAQ9Y285 508 aaKnown RBP16.76■□□□□ 0.27
SMPD1-201ENST00000342245 A0A1W2PPE2 198 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 A8MWP6 167 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 KCNAB3O43448 404 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 SYT7O43581 403 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 ALOX12BO75342 701 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 CSTBP04080 98 aaKnown RBP16.76■□□□□ 0.27
SMPD1-201ENST00000342245 DAOP14920 347 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 THPOP40225 353 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 GUK1Q16774 197 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 TMEM35AQ53FP2 167 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 SPNS3Q6ZMD2 512 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 SMDT1Q9H4I9 107 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 SAGE1Q9NXZ1 904 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 COL4A3Q01955 1670 aa16.76■□□□□ 0.27
SMPD1-201ENST00000342245 TRAV8-7A0A075B6U6 113 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 A0A087WUJ7 227 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 ZNF726A6NNF4 738 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 H7C4K7 107 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 AIFM1O95831 613 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 AKR1A1P14550 325 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 HIST1H1CP16403 213 aaKnown RBP16.75■□□□□ 0.27
SMPD1-201ENST00000342245 NKX6-1P78426 367 aaPredicted RBP16.75■□□□□ 0.27
SMPD1-201ENST00000342245 ARHGAP11BQ3KRB8 267 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 C14orf28Q4W4Y0 310 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 OR2A2Q6IF42 318 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 OR4K13Q8NH42 304 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 TERB2Q8NHR7 220 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 RNF166Q96A37 237 aaPredicted RBP16.75■□□□□ 0.27
SMPD1-201ENST00000342245 ARMC5Q96C12 935 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 SLC35A4Q96G79 324 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 TNFRSF13CQ96RJ3 184 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 ZDHHC6Q9H6R6 413 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 TMEM212A6NML5 194 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 GAPDHP04406 335 aaKnown RBP16.75■□□□□ 0.27
SMPD1-201ENST00000342245 DBIP07108 87 aaKnown RBP16.75■□□□□ 0.27
SMPD1-201ENST00000342245 OR8U9P0C7N5 309 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 PRKAR2AP13861 404 aaKnown RBP16.75■□□□□ 0.27
SMPD1-201ENST00000342245 FGF7P21781 194 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 IGFALSP35858 605 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 Q6ZVL8 140 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 AVL9Q8NBF6 648 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 OR2L5Q8NG80 312 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 OR8U1Q8NH10 309 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 PBDC1Q9BVG4 233 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 RAB18Q9NP72 206 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 KCNJ16Q9NPI9 418 aa16.75■□□□□ 0.27
SMPD1-201ENST00000342245 HSPB2A8KAH6 182 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 ZNF724A8MTY0 619 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 CLEC3AO75596 197 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 NDUFB2O95178 105 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 CTSAP10619 480 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 AK4P27144 223 aaPredicted RBP16.74■□□□□ 0.27
SMPD1-201ENST00000342245 RPS23P62266 143 aaKnown RBP16.74■□□□□ 0.27
SMPD1-201ENST00000342245 HSPB2Q16082 182 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 CYB5R2Q6BCY4 276 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 ZNF529Q6P280 563 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 C22orf39Q6P5X5 142 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 TAF8Q7Z7C8 310 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 CASTOR1Q8WTX7 329 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 CNRIP1Q96F85 164 aaPredicted RBP16.74■□□□□ 0.27
SMPD1-201ENST00000342245 RAB33BQ9H082 229 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 VSX1Q9NZR4 365 aaPredicted RBP16.74■□□□□ 0.27
SMPD1-201ENST00000342245 VWA8A3KMH1 1905 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 H0YIZ8 118 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 PSMD9O00233 223 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 EFSO43281 561 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 PRICKLE3O43900 615 aaPredicted RBP16.74■□□□□ 0.27
SMPD1-201ENST00000342245 JTBO76095 146 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 TIMP2P16035 220 aa16.74■□□□□ 0.27
SMPD1-201ENST00000342245 PPM1FP49593 454 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms