RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 LRRC28Q86X40 367 aaPredicted RBP11.76□□□□□ -0.53
COL18A1-201ENST00000342220 RFLNBQ8N5W9 214 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 CREB3L1Q96BA8 519 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 SPACA9Q96E40 222 aaPredicted RBP11.76□□□□□ -0.53
COL18A1-201ENST00000342220 TAAR9Q96RI9 348 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 UBL7Q96S82 380 aaPredicted RBP11.76□□□□□ -0.53
COL18A1-201ENST00000342220 HES7Q9BYE0 225 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 CHRNA10Q9GZZ6 450 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 EXO5Q9H790 373 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 PCDHGA5Q9Y5G8 931 aa11.76□□□□□ -0.53
COL18A1-201ENST00000342220 VSTM2BA6NLU5 285 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 ALG1L2C9J202 215 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 NPIPB9F8W1W9 429 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 TP53I11O14683 189 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 ST8SIA5O15466 376 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 TOXO94900 526 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 FTH1P19P0C7X4 201 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 SLC6A1P30531 599 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 SSR4P51571 173 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 BDH1Q02338 343 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 TLE3Q04726 772 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 LTBQ06643 244 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 C17orf67Q0P5P2 114 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 MEP1BQ16820 701 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 SWI5Q1ZZU3 235 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 SLC25A35Q3KQZ1 300 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 LNX2Q8N448 690 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 OR13C5Q8NGS8 318 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 C4orf36Q96KX1 117 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 ABHD1Q96SE0 405 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 ZMIZ1Q9ULJ6 1067 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 A0A1W2PNU3 283 aaPredicted RBP11.75□□□□□ -0.53
COL18A1-201ENST00000342220 FAM74A7A6NL05 159 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 FAM166BA8MTA8 275 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 KDM4BO94953 1096 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 GALP22466 123 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 MAGEB1P43366 347 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 OR12D2P58182 307 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 FAM74A3Q4VXF1 159 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 PLA1AQ53H76 456 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 MRPL14Q6P1L8 145 aaKnown RBP11.75□□□□□ -0.53
COL18A1-201ENST00000342220 OR14L1PQ8NHC6 308 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 CXorf58Q96LI9 332 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 TEAD3Q99594 435 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 LUZP4Q9P127 313 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 ZNF337Q9Y3M9 751 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 ICE1Q9Y2F5 2266 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 AKAP13Q12802 2813 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 IGKV1D-42A0A075B6H8 117 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 TMEM72A0PK05 275 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 OR6C68A6NDL8 312 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 SLC16A7O60669 478 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 CCL11P51671 97 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 DEFA5Q01523 94 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 HSF2Q03933 536 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 EGR4Q05215 589 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 PCOLCEQ15113 449 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 ZNF124Q15973 351 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 C1orf140Q5VVS0 124 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 SYT9Q86SS6 491 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 RNF113BQ8IZP6 322 aaKnown RBP11.75□□□□□ -0.53
COL18A1-201ENST00000342220 NFAM1Q8NET5 270 aaPredicted RBP11.75□□□□□ -0.53
COL18A1-201ENST00000342220 ZNRF4Q8WWF5 429 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 GAL3ST1Q99999 423 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 SLC19A3Q9BZV2 496 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 PTGES2Q9H7Z7 377 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 ZFP64Q9NPA5 681 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 CENPMQ9NSP4 180 aa11.75□□□□□ -0.53
COL18A1-201ENST00000342220 MT-ND5P03915 603 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 PNMTP11086 282 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 KLK2P20151 261 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 BTCP35070 178 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 PITPNBP48739 271 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 ZNF385CQ66K41 422 aaPredicted RBP11.74□□□□□ -0.53
COL18A1-201ENST00000342220 SLC16A13Q7RTY0 426 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 ABHD4Q8TB40 342 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 TRMT10AQ8TBZ6 339 aaKnown RBP11.74□□□□□ -0.53
COL18A1-201ENST00000342220 NXPE2Q96DL1 559 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 NKX3-1Q99801 234 aaPredicted RBP11.74□□□□□ -0.53
COL18A1-201ENST00000342220 LAT2Q9GZY6 243 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 MMP25Q9NPA2 562 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 ICAM5Q9UMF0 924 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 PHF3Q92576 2039 aaKnown RBP11.74□□□□□ -0.53
COL18A1-201ENST00000342220 A0A0G2JK05 382 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 LOC101059948A0A1B0GTJ6 334 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 KRBOX1C9JBD0 128 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 M0R233 179 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 LYPD3O95274 346 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 SPARCP09486 303 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 DPP4P27487 766 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 CDKN2AP42771 156 aaKnown RBP11.74□□□□□ -0.53
COL18A1-201ENST00000342220 SOX2P48431 317 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 CAMK2DQ13557 499 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 TRA2AQ13595 282 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL18A1-201ENST00000342220 IL10RAQ13651 578 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 ZNF74Q16587 644 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 GFOD2Q3B7J2 385 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 LGALSLQ3ZCW2 172 aaPredicted RBP11.74□□□□□ -0.53
COL18A1-201ENST00000342220 ALKBH2Q6NS38 261 aa11.74□□□□□ -0.53
COL18A1-201ENST00000342220 ZNF440Q8IYI8 595 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms