RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 SLC25A28Q96A46 364 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 PRMT8Q9NR22 394 aaPredicted RBP13.07□□□□□ -0.32
TDP2-201ENST00000341060 CTSFQ9UBX1 484 aa13.07□□□□□ -0.32
TDP2-201ENST00000341060 CD37P11049 281 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 HLA-DOBP13765 273 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 GTF2F2P13984 249 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 NFYAP23511 347 aaPredicted RBP13.06□□□□□ -0.32
TDP2-201ENST00000341060 ARPC4P59998 168 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 OPCMLQ14982 345 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 OR5M10Q6IEU7 315 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 MDGA2Q7Z553 956 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 PLPP5Q8NEB5 264 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 OR6S1Q8NH40 331 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 GPX8Q8TED1 209 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 TMEM234Q8WY98 164 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 ZNF501Q96CX3 271 aaPredicted RBP13.06□□□□□ -0.32
TDP2-201ENST00000341060 COA3Q9Y2R0 106 aaPredicted RBP13.06□□□□□ -0.32
TDP2-201ENST00000341060 CABIN1Q9Y6J0 2220 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 CXCL2P19875 107 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 HTR2CP28335 458 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 CSNK1EP49674 416 aaKnown RBP13.06□□□□□ -0.32
TDP2-201ENST00000341060 DLX5P56178 289 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 ACTBP60709 375 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 ACTG1P63261 375 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 RNF4P78317 190 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 FAM198BQ6UWH4 519 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 NHLRC1Q6VVB1 395 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 PRSS42Q7Z5A4 293 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 ZNF248Q8NDW4 579 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 OR51S1Q8NGJ8 323 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 MAFAQ8NHW3 353 aaPredicted RBP13.06□□□□□ -0.32
TDP2-201ENST00000341060 ELMOD3Q96FG2 381 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 GSX2Q9BZM3 304 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 ATG5Q9H1Y0 275 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 TAS2R4Q9NYW5 299 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 OPN4Q9UHM6 478 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 TMA7Q9Y2S6 64 aaKnown RBP13.06□□□□□ -0.32
TDP2-201ENST00000341060 R4GMQ9 66 aa13.06□□□□□ -0.32
TDP2-201ENST00000341060 MEN1O00255 615 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 MPZL1O95297 269 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 CD3DP04234 171 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 RLN1P04808 185 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 ISG15P05161 165 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 GLB1P16278 677 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 IL11P20809 199 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 PTGS2P35354 604 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 PCK2Q16822 640 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 KMT5CQ86Y97 462 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 SLC26A10Q8NG04 563 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 ST8SIA1Q92185 356 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 PNPLA2Q96AD5 504 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 SLC25A44Q96H78 314 aaPredicted RBP13.05□□□□□ -0.32
TDP2-201ENST00000341060 FGF21Q9NSA1 209 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 HHLA2Q9UM44 414 aa13.05□□□□□ -0.32
TDP2-201ENST00000341060 MEIS3P1A6NDR6 274 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 TUBAL3A6NHL2 446 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 A6NIZ1 184 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 MS4A18H0YCH9 400 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 L7N2F9 121 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 SULT1C2O00338 296 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 PDGFAP04085 211 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 RRASP10301 218 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 H2BFSP57053 126 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 RAB14P61106 215 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 RAP1BP61224 184 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 RAP1AP62834 184 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 ZP4Q12836 540 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 MS4A18Q3C1V0 323 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 GLYATL3Q5SZD4 288 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 SIGIRRQ6IA17 410 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 STEAP1BQ6NZ63 245 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 COMMD7Q86VX2 200 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 KDM8Q8N371 416 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 OR6M1Q8NGM8 313 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 OR5M1Q8NGP8 315 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 ASB10Q8WXI3 467 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 WDR89Q96FK6 387 aaPredicted RBP13.04□□□□□ -0.32
TDP2-201ENST00000341060 NKX3-1Q99801 234 aaPredicted RBP13.04□□□□□ -0.32
TDP2-201ENST00000341060 G6PC2Q9NQR9 355 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 EMC9Q9Y3B6 208 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 ASCC3Q8N3C0 2202 aaKnown RBP13.04□□□□□ -0.32
TDP2-201ENST00000341060 ANKUB1A6NFN9 424 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 NPIPB13A6NJU9 1138 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 OR6C65A6NJZ3 312 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 NPIPB4C9JG80 1138 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 MCRIP1C9JLW8 97 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 RGS11O94810 467 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 LPLP06858 475 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 MELTFP08582 738 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 GABRA1P14867 456 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 UBXN2BQ14CS0 331 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 MFSD13AQ14CX5 517 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 DNM1P34Q6PK57 102 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 WDR74Q6RFH5 385 aaPredicted RBP13.04□□□□□ -0.32
TDP2-201ENST00000341060 SHISA6Q6ZSJ9 500 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 RFPL4BQ6ZWI9 263 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 COX15Q7KZN9 410 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 DCXRQ7Z4W1 244 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 APCDD1LQ8NCL9 501 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 OR2AK2Q8NG84 335 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms