RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PHYHD1Q5SRE7 291 aa15.35■□□□□ 0.05
CLDN4-201ENST00000340958 RPUSD3Q6P087 351 aaKnown RBP15.35■□□□□ 0.05
CLDN4-201ENST00000340958 FAM180AQ6UWF9 173 aa15.35■□□□□ 0.05
CLDN4-201ENST00000340958 DCXRQ7Z4W1 244 aa15.35■□□□□ 0.05
CLDN4-201ENST00000340958 OR5M9Q8NGP3 310 aa15.35■□□□□ 0.05
CLDN4-201ENST00000340958 NDNFQ8TB73 568 aa15.35■□□□□ 0.05
CLDN4-201ENST00000340958 CENPOQ9BU64 300 aa15.35■□□□□ 0.05
CLDN4-201ENST00000340958 EMC7Q9NPA0 242 aa15.35■□□□□ 0.05
CLDN4-201ENST00000340958 TUBD1Q9UJT1 453 aa15.35■□□□□ 0.05
CLDN4-201ENST00000340958 KIAA1549Q9HCM3 1950 aa15.35■□□□□ 0.05
CLDN4-201ENST00000340958 IGKV3D-15A0A087WSY6 115 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 A0A1B0GVC2 190 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 GPX5O75715 221 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 SULT1C4O75897 302 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 YES1P07947 543 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 RPL22L1Q6P5R6 122 aaKnown RBP15.34■□□□□ 0.05
CLDN4-201ENST00000340958 CORO6Q6QEF8 472 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 LRRN1Q6UXK5 716 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 GDPGP1Q6ZNW5 385 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.34■□□□□ 0.05
CLDN4-201ENST00000340958 DRAXINQ8NBI3 349 aaPredicted RBP15.34■□□□□ 0.05
CLDN4-201ENST00000340958 KBTBD8Q8NFY9 601 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 TMEM45BQ96B21 275 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 TRIB1Q96RU8 372 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 ABHD6Q9BV23 337 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 PRDM14Q9GZV8 571 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 ELOVL3Q9HB03 270 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 MRM2Q9UI43 246 aaKnown RBP15.34■□□□□ 0.05
CLDN4-201ENST00000340958 ZNF407Q9C0G0 2248 aa15.34■□□□□ 0.05
CLDN4-201ENST00000340958 TRBV2A0A0J9YWF9 115 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 LRRTM2O43300 516 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 UPK3AO75631 287 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 C1QL1O75973 258 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 HLA-DPB1P04440 258 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 PSKH1P11801 424 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 ZNF182P17025 639 aaPredicted RBP15.33■□□□□ 0.05
CLDN4-201ENST00000340958 TGFBR1P36897 503 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 CCDC58Q4VC31 144 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 TEX30Q5JUR7 227 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 C10orf128Q5T292 105 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 USP43Q70EL4 1123 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.33■□□□□ 0.05
CLDN4-201ENST00000340958 SIAH3Q8IW03 269 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 HAVCR2Q8TDQ0 301 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 ALKBH3Q96Q83 286 aaPredicted RBP15.33■□□□□ 0.05
CLDN4-201ENST00000340958 CRLF2Q9HC73 371 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 CENPMQ9NSP4 180 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 SLCO1C1Q9NYB5 712 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 FOXD3Q9UJU5 478 aaPredicted RBP15.33■□□□□ 0.05
CLDN4-201ENST00000340958 ZNF175Q9Y473 711 aa15.33■□□□□ 0.05
CLDN4-201ENST00000340958 SIRT4Q9Y6E7 314 aaPredicted RBP15.33■□□□□ 0.05
CLDN4-201ENST00000340958 ZNF724A8MTY0 619 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 PRR32B1ATL7 298 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 ZNHIT1O43257 154 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 MSR1P21757 451 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 CRYBB2P43320 205 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 SERPINB10P48595 397 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 MRPL28Q13084 256 aaKnown RBP15.33■□□□□ 0.04
CLDN4-201ENST00000340958 LIPNQ5VXI9 398 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF100Q8IYN0 542 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF679Q8IYX0 411 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 OR52N5Q8NH56 324 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 HTRA1Q92743 480 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 OR8B4Q96RC9 309 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 AMELYQ99218 206 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 HDHD5Q9BXW7 423 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 SLC25A18Q9H1K4 315 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 DCSTAMPQ9H295 470 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 C1orf198Q9H425 327 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 RNF167Q9H6Y7 350 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 POLE4Q9NR33 117 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 GTF2A1LQ9UNN4 478 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 GSTK1Q9Y2Q3 226 aa15.33■□□□□ 0.04
CLDN4-201ENST00000340958 PLPP2O43688 288 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 DNAJC13O75165 2243 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 WISP2O76076 250 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 TGM6O95932 706 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 IGHV3-9P01782 118 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 SFTPCP11686 197 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 NTF4P34130 210 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 RIDAP52758 137 aaKnown RBP15.32■□□□□ 0.04
CLDN4-201ENST00000340958 C22orf42Q6IC83 251 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF585AQ6P3V2 769 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 EGFL6Q8IUX8 553 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 UBE2J2Q8N2K1 259 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 APH1AQ96BI3 265 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 SLCO5A1Q9H2Y9 848 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 NELFAQ9H3P2 528 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 BCO1Q9HAY6 547 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 ASH2LQ9UBL3 628 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 UPB1Q9UBR1 384 aa15.32■□□□□ 0.04
CLDN4-201ENST00000340958 OR6C65A6NJZ3 312 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 H2BFMP0C1H6 154 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 GDI2P50395 445 aaKnown RBP15.31■□□□□ 0.04
CLDN4-201ENST00000340958 CDK5R1Q15078 307 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 TAF13Q15543 124 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 TRAM1Q15629 374 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF684Q5T5D7 378 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 OR7E24Q6IFN5 339 aa15.31■□□□□ 0.04
CLDN4-201ENST00000340958 ZNF544Q6NX49 715 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms