RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 HLA-DOBP13765 273 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 APEX1P27695 318 aaKnown RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 OR6K6Q8NGW6 343 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 C11orf40Q8WZ69 217 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 C4orf45Q96LM5 186 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 ULBP2Q9BZM5 246 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 WDR12Q9GZL7 423 aaKnown RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 SLC6A15Q9H2J7 730 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 GPR35Q9HC97 309 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 AASSQ9UDR5 926 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 NUFIP1Q9UHK0 495 aaKnown RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 COA3Q9Y2R0 106 aaPredicted RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 SLC22A20A6NK97 555 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 SELENOFO60613 162 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 CLPXO76031 633 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 UBL3O95164 117 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 QDPRP09417 244 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 GADD45AP24522 165 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 ADAM8P78325 824 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 PIGFQ07326 219 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 LRFN4Q6PJG9 635 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 FAM180AQ6UWF9 173 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 BCDIN3DQ7Z5W3 292 aaKnown RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 LHFPL3Q86UP9 236 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 ZNF100Q8IYN0 542 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 FAM57AQ8TBR7 257 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 RNF166Q96A37 237 aaPredicted RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 KCNJ15Q99712 375 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 ABCB9Q9NP78 766 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 TXNL4BQ9NX01 149 aaKnown RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 LHX6Q9UPM6 363 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 NOSIPQ9Y314 301 aaKnown RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 EMC9Q9Y3B6 208 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 MYO15AQ9UKN7 3530 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 AHCTF1Q8WYP5 2266 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 MEGF11A6BM72 1044 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 ZNF814B7Z6K7 855 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 SHISA8B8ZZ34 492 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 ZNF587BE7ETH6 402 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 FARS2O95363 451 aaKnown RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 TPOP07202 933 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 PYCR1P32322 319 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 EIF1AXP47813 144 aaKnown RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 RIN1Q13671 783 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 EIF2B1Q14232 305 aaKnown RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 MELKQ14680 651 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.34□□□□□ -1.39
NUP43-201ENST00000340413 MCEMP1Q8IX19 187 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 OR6N1Q8NGY5 312 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 OR6N2Q8NGY6 317 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 SLC25A46Q96AG3 418 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 TXNDC15Q96J42 360 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 SLX1AQ9BQ83 275 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 ABHD6Q9BV23 337 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 AMBNQ9NP70 447 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 ADAM30Q9UKF2 790 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 COPS3Q9UNS2 423 aa6.34□□□□□ -1.39
NUP43-201ENST00000340413 MRPL33O75394 65 aaKnown RBP6.33□□□□□ -1.4
NUP43-201ENST00000340413 SERPINA5P05154 406 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 CLUP10909 449 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 EDN3P14138 238 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 MPGP29372 298 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 AGTR1P30556 359 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 GDI2P50395 445 aaKnown RBP6.33□□□□□ -1.4
NUP43-201ENST00000340413 RORCP51449 518 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 TMEM53Q6P2H8 277 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 ANKRD16Q6P6B7 361 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 KLHL24Q6TFL4 600 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 DRAM2Q6UX65 266 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 LRRN1Q6UXK5 716 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 PLPP7Q8NBV4 271 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 GATAD2BQ8WXI9 593 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 APH1AQ96BI3 265 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 FOXRED1Q96CU9 486 aaPredicted RBP6.33□□□□□ -1.4
NUP43-201ENST00000340413 ITPKCQ96DU7 683 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 MAP6Q96JE9 813 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 SFXN3Q9BWM7 321 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 DCSTAMPQ9H295 470 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 NEK6Q9HC98 313 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 SRA1Q9HD15 236 aaKnown RBP6.33□□□□□ -1.4
NUP43-201ENST00000340413 PNRC2Q9NPJ4 139 aaKnown RBP6.33□□□□□ -1.4
NUP43-201ENST00000340413 PLSCR4Q9NRQ2 329 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 PNMA8CA0A1B0GUJ8 204 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 OR6C6A6NF89 314 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 FIGNL2A6NMB9 653 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 OR4C45A6NMZ5 311 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 FAM166BA8MTA8 275 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 DCTN6O00399 190 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 ALDOBP05062 364 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 OR8G3PP0DMU2 310 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 COX5AP20674 150 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 MYL9P24844 172 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 TDGF1P3P51864 188 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 RBPJQ06330 500 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 RUNX1T1Q06455 604 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 ENDOGQ14249 297 aaKnown RBP6.33□□□□□ -1.4
NUP43-201ENST00000340413 Q499Y3 187 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 ACSF3Q4G176 576 aaPredicted RBP6.33□□□□□ -1.4
NUP43-201ENST00000340413 C1orf185Q5T7R7 199 aa6.33□□□□□ -1.4
NUP43-201ENST00000340413 MZT2AQ6P582 158 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms