RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 ZNF684Q5T5D7 378 aa16.93■□□□□ 0.3
PSPC1-201ENST00000338910 C1orf189Q5VU69 101 aa16.93■□□□□ 0.3
PSPC1-201ENST00000338910 OR2W3Q7Z3T1 314 aa16.93■□□□□ 0.3
PSPC1-201ENST00000338910 TMPRSS12Q86WS5 348 aa16.93■□□□□ 0.3
PSPC1-201ENST00000338910 LDLRAD3Q86YD5 345 aa16.93■□□□□ 0.3
PSPC1-201ENST00000338910 LURAP1LQ8IV03 231 aa16.93■□□□□ 0.3
PSPC1-201ENST00000338910 ZSCAN1Q8NBB4 408 aa16.93■□□□□ 0.3
PSPC1-201ENST00000338910 TSNAXQ99598 290 aaKnown RBP16.93■□□□□ 0.3
PSPC1-201ENST00000338910 ZNF230Q9UIE0 474 aaPredicted RBP16.93■□□□□ 0.3
PSPC1-201ENST00000338910 CD8AP01732 235 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 SLC37A1P57057 533 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 PPIAP62937 165 aaKnown RBP16.92■□□□□ 0.3
PSPC1-201ENST00000338910 ZNF345Q14585 488 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 ZNF528Q3MIS6 628 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 CCDC157Q569K6 752 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 CCDC36Q8IYA8 594 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 FAM117AQ9C073 453 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 ZNF768Q9H5H4 540 aaKnown RBP16.92■□□□□ 0.3
PSPC1-201ENST00000338910 EXO5Q9H790 373 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 TMEM185BQ9H7F4 350 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 TMEM218A2RU14 115 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 GGT3PA6NGU5 568 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 MCIDASD6RGH6 385 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 PRSS44E7EML9 344 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 IMPA2O14732 288 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 GTF2F2P13984 249 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 PSMD4P55036 377 aaKnown RBP16.92■□□□□ 0.3
PSPC1-201ENST00000338910 GUCA2AQ02747 115 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 MICBQ29980 383 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 YOD1Q5VVQ6 348 aaPredicted RBP16.92■□□□□ 0.3
PSPC1-201ENST00000338910 HAGHLQ6PII5 290 aaPredicted RBP16.92■□□□□ 0.3
PSPC1-201ENST00000338910 SVBPQ8N300 66 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 PHYHIPLQ96FC7 376 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 ZNF75AQ96N20 296 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 IER2Q9BTL4 223 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 NXF5Q9H1B4 397 aaKnown RBP16.92■□□□□ 0.3
PSPC1-201ENST00000338910 ZNF337Q9Y3M9 751 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 ADAM18Q9Y3Q7 739 aa16.92■□□□□ 0.3
PSPC1-201ENST00000338910 CCDC163A0A0D9SF12 145 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 KANTRA0A1W2PQU2 76 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 NDUFB2O95178 105 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 ITGB2P05107 769 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 HOXA6P31267 233 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 EFNA3P52797 238 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 LINC00114Q6XXX2 140 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 BEST3Q8N1M1 668 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 NPEPL1Q8NDH3 523 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 OR6K6Q8NGW6 343 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 NUDT22Q9BRQ3 303 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 CTSFQ9UBX1 484 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 BCL2L11O43521 198 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 PMS2P2O95744 297 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 APOC1P02654 83 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 MELTFP08582 738 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 HPGDP15428 266 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 SPI1P17947 270 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 GRPRP30550 384 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 GALNSP34059 522 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 RORAP35398 523 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 RBM34P42696 430 aaKnown RBP16.91■□□□□ 0.3
PSPC1-201ENST00000338910 SOX2P48431 317 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 MEOX2P50222 304 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 SCAND1P57086 179 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.91■□□□□ 0.32e-7■■■■■ 45
PSPC1-201ENST00000338910 KLHL26Q53HC5 615 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 PMS2CLQ68D20 193 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 ANKRD16Q6P6B7 361 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 D2HGDHQ8N465 521 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 C12orf45Q8N5I9 185 aaPredicted RBP16.91■□□□□ 0.3
PSPC1-201ENST00000338910 OR8K3Q8NH51 312 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 ZPLD1Q8TCW7 415 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 NMNAT3Q96T66 252 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 POFUT1Q9H488 388 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 TNFSF18Q9UNG2 199 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 HEATR5AQ86XA9 2040 aa16.91■□□□□ 0.3
PSPC1-201ENST00000338910 WDFY3Q8IZQ1 3526 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 RAB19A4D1S5 217 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 OR5H14A6NHG9 310 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 OR2F2O95006 317 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 CD3DP04234 171 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 ADCYAP1P18509 176 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 ZXDAP98168 799 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 OR2F1Q13607 317 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 GUCA2BQ16661 112 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 PAN3Q58A45 887 aaKnown RBP16.9■□□□□ 0.3
PSPC1-201ENST00000338910 SLC35D3Q5M8T2 416 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 PRR22Q8IZ63 422 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 CLEC1AQ8NC01 280 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 FANCFQ9NPI8 374 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 BIN3Q9NQY0 253 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 GPN3Q9UHW5 284 aaPredicted RBP16.9■□□□□ 0.3
PSPC1-201ENST00000338910 PCDHB10Q9UN67 800 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 BDP1A6H8Y1 2624 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 NCOR1O75376 2440 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 TRBV5-5A0A0J9YX44 114 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 CDC14CA4D256 554 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 OR6C68A6NDL8 312 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 EFCAB7A8K855 629 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 FAM25EA8MYX2 175 aa16.9■□□□□ 0.3
PSPC1-201ENST00000338910 CTAG2O75638 210 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms