RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CALCBP10092 127 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 RAG2P55895 527 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 ZNF616Q08AN1 781 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 SMCO1Q147U7 214 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 GUCA2BQ16661 112 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 NKAPLQ5M9Q1 402 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 CLRN3Q8NCR9 226 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 OR13H1Q8NG92 308 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 OR5M9Q8NGP3 310 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 FOXRED1Q96CU9 486 aaPredicted RBP12.8□□□□□ -0.36
PCDH8-201ENST00000338862 STACQ99469 402 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 CMSS1Q9BQ75 279 aaKnown RBP12.8□□□□□ -0.36
PCDH8-201ENST00000338862 NXF5Q9H1B4 397 aaKnown RBP12.8□□□□□ -0.36
PCDH8-201ENST00000338862 NPDC1Q9NQX5 325 aaPredicted RBP12.8□□□□□ -0.36
PCDH8-201ENST00000338862 CSAG2Q9Y5P2 127 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 A0A087WUJ7 227 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 IGHV3-20A0A0C4DH32 117 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 TMEM212A6NML5 194 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 TMEM150CB9EJG8 249 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 ZNF264O43296 627 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 TNFP01375 233 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 SLC35E2P0CK97 266 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 ZNF20P17024 532 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 FMODQ06828 376 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 WBP2NLQ6ICG8 309 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 TMED7Q9Y3B3 224 aa12.8□□□□□ -0.36
PCDH8-201ENST00000338862 NPIPA5E9PKD4 350 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 SULT1B1O43704 296 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 GSTZ1O43708 216 aaPredicted RBP12.79□□□□□ -0.36
PCDH8-201ENST00000338862 LMX1BO60663 402 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 STK17BO94768 372 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 RAB3AP20336 220 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 HRH1P35367 487 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 PMPCAQ10713 525 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 ACKR1Q16570 336 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 PAPD4Q6PIY7 484 aaKnown RBP12.79□□□□□ -0.36
PCDH8-201ENST00000338862 SLC29A4Q7RTT9 530 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 C7orf61Q8IZ16 206 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 OR1J4Q8NGS1 313 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 MARCH1Q8TCQ1 289 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 CD300LFQ8TDQ1 290 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 NPIPA1Q9UND3 350 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 CCDC163A0A0D9SF12 145 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 TMEM272A0A1B0GTI8 110 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 TCRBV21S2A2A0A5A6 115 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 AHSA1O95433 338 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 NAT2P11245 290 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 AKT2P31751 481 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 PPP1R1AQ13522 171 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 NSDHLQ15738 373 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 MOGAT2Q3SYC2 334 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 MANEAQ5SRI9 462 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 CLEC9AQ6UXN8 241 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 TMEM151BQ8IW70 566 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 FGF14Q92915 247 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 TSLPQ969D9 159 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 TOE1Q96GM8 510 aaKnown RBP12.79□□□□□ -0.36
PCDH8-201ENST00000338862 SLC17A4Q9Y2C5 497 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 PLXNB3Q9ULL4 1909 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 A0A0J9YY10 115 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 EFEMP2O95967 443 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 SDHAP31040 664 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 PLCXD2Q0VAA5 305 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 RASGEF1BQ0VAM2 473 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 TMEM196Q5HYL7 178 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 NKAIN2Q5VXU1 208 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 DCXRQ7Z4W1 244 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 FJX1Q86VR8 437 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 SPICQ8N5J4 248 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 ROBO4Q8WZ75 1007 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 TAAR8Q969N4 342 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 MRPS24Q96EL2 167 aaKnown RBP12.79□□□□□ -0.36
PCDH8-201ENST00000338862 DCBLD2Q96PD2 775 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 KLHDC3Q9BQ90 382 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 PBX4Q9BYU1 374 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 TPSD1Q9BZJ3 242 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 DNTTIP1Q9H147 329 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 MED29Q9NX70 200 aa12.79□□□□□ -0.36
PCDH8-201ENST00000338862 SHISA8B8ZZ34 492 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 UTS2O95399 124 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 SNRNP70P08621 437 aaKnown RBP12.78□□□□□ -0.36
PCDH8-201ENST00000338862 CNR1P21554 472 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 SERPINF1P36955 418 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 PPT1P50897 306 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 RPS27AP62979 156 aaKnown RBP12.78□□□□□ -0.36
PCDH8-201ENST00000338862 UBA52P62987 128 aaKnown RBP12.78□□□□□ -0.36
PCDH8-201ENST00000338862 TOMM20Q15388 145 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 BATF2Q8N1L9 274 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 FAM160A2Q8N612 972 aaPredicted RBP12.78□□□□□ -0.36
PCDH8-201ENST00000338862 RPS10P5Q9NQ39 176 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 GLS2Q9UI32 602 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 ATPIF1Q9UII2 106 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 TNFSF12O43508 249 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 RAB6AP20340 208 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 HSD11B1P28845 292 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 TSFMP43897 325 aaKnown RBP12.78□□□□□ -0.36
PCDH8-201ENST00000338862 VEGFBP49765 207 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 PDZK1IP1Q13113 114 aa12.78□□□□□ -0.36
PCDH8-201ENST00000338862 NFATC4Q14934 902 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms