RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 FAM98BQ52LJ0 330 aaKnown RBP13.11□□□□□ -0.31
PRKN-201ENST00000338468 OR2T5Q6IEZ7 315 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 ADCK1Q86TW2 530 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 OR2T29Q8NH02 315 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 C10orf105Q8TEF2 133 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 TSSK2Q96PF2 358 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 ERMAPQ96PL5 475 aaPredicted RBP13.11□□□□□ -0.31
PRKN-201ENST00000338468 VRK1Q99986 396 aaPredicted RBP13.11□□□□□ -0.31
PRKN-201ENST00000338468 SYT3Q9BQG1 590 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 NUAK2Q9H093 628 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 KCNN2Q9H2S1 579 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 CDH20Q9HBT6 801 aa13.11□□□□□ -0.31
PRKN-201ENST00000338468 COA3Q9Y2R0 106 aaPredicted RBP13.11□□□□□ -0.31
PRKN-201ENST00000338468 AQP12BA6NM10 295 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 VSTM5A8MXK1 200 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 GPANK1O95872 356 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 RAP2AP10114 183 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 HIST1H1CP16403 213 aaKnown RBP13.1□□□□□ -0.31
PRKN-201ENST00000338468 UCP2P55851 309 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 DSCR9P59020 149 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 RPS23P62266 143 aaKnown RBP13.1□□□□□ -0.31
PRKN-201ENST00000338468 PLP2Q04941 152 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 BNIP1Q12981 228 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 DNAL1Q4LDG9 190 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 ZNF774Q6NX45 483 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 CLEC2AQ6UVW9 174 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 SYT9Q86SS6 491 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 AQP12AQ8IXF9 295 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 OR8D4Q8NGM9 314 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 OR1J2Q8NGS2 313 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 CANT1Q8WVQ1 401 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 RHNO1Q9BSD3 238 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 PLA2G12AQ9BZM1 189 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 OR51B6Q9H340 312 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 EGLN3Q9H6Z9 239 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 TIMM10BQ9Y5J6 103 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 U3KQV3 271 aa13.1□□□□□ -0.31
PRKN-201ENST00000338468 IGLV1-36A0A0B4J1U3 117 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 RNF212BA8MTL3 300 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 C12orf71A8MTZ7 269 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 VWC2LB2RUY7 222 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 KHDRBS3O75525 346 aaKnown RBP13.09□□□□□ -0.31
PRKN-201ENST00000338468 CCNB2O95067 398 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 CLPTM1O96005 669 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 ADRA2AP08913 450 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 APLNRP35414 380 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 ALDH3B1P43353 468 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 MAD2L1BPQ15013 274 aaPredicted RBP13.09□□□□□ -0.31
PRKN-201ENST00000338468 TMEM255AQ5JRV8 349 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 GLB1L2Q8IW92 636 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 ZNF101Q8IZC7 436 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 OR6V1Q8N148 313 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 AQP11Q8NBQ7 271 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 OR4K13Q8NH42 304 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 FAM168AQ92567 244 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 POP5Q969H6 163 aaKnown RBP13.09□□□□□ -0.31
PRKN-201ENST00000338468 LRGUKQ96M69 825 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 NMNAT3Q96T66 252 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 IFT27Q9BW83 186 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 CHID1Q9BWS9 393 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 CADM1Q9BY67 442 aaKnown RBP13.09□□□□□ -0.31
PRKN-201ENST00000338468 RERGLQ9H628 205 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 IL20Q9NYY1 176 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 FBXO9Q9UK97 447 aaPredicted RBP13.09□□□□□ -0.31
PRKN-201ENST00000338468 SAMHD1Q9Y3Z3 626 aaKnown RBP13.09□□□□□ -0.31
PRKN-201ENST00000338468 FKBP7Q9Y680 259 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 CDH10Q9Y6N8 788 aa13.09□□□□□ -0.31
PRKN-201ENST00000338468 SONP18583 2426 aaKnown RBP13.09□□□□□ -0.31
PRKN-201ENST00000338468 CHD3Q12873 2000 aaKnown RBP13.08□□□□□ -0.31
PRKN-201ENST00000338468 IGLV3-9A0A075B6K5 115 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 C5orf49A4QMS7 147 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 OR6C68A6NDL8 312 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 BHLHE40O14503 412 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 GSC2O15499 205 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 SYNGR3O43761 229 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 ICMTO60725 284 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 DNAJC8O75937 253 aaPredicted RBP13.08□□□□□ -0.32
PRKN-201ENST00000338468 TP53P04637 393 aaPredicted RBP13.08□□□□□ -0.32
PRKN-201ENST00000338468 GAAP10253 952 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 ZNF250P15622 560 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 GUCA1AP43080 201 aaPredicted RBP13.08□□□□□ -0.32
PRKN-201ENST00000338468 PCBD1P61457 104 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 KCNMB1Q16558 191 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 MICAQ29983 383 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 CLEC12AQ5QGZ9 265 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 ZNF362Q5T0B9 420 aaPredicted RBP13.08□□□□□ -0.32
PRKN-201ENST00000338468 RGS7BPQ6MZT1 257 aaPredicted RBP13.08□□□□□ -0.32
PRKN-201ENST00000338468 LEG1Q6P5S2 330 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 LINC00471Q8N535 108 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 NPEPL1Q8NDH3 523 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 C11orf40Q8WZ69 217 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 SNX18Q96RF0 628 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 DDOQ99489 341 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 WACQ9BTA9 647 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 DGCR6LQ9BY27 220 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 RAB1BQ9H0U4 201 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 LRMDAQ9H2I8 198 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 TPK1Q9H3S4 243 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 REEP1Q9H902 201 aa13.08□□□□□ -0.32
PRKN-201ENST00000338468 DYNLRB1Q9NP97 96 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms