RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 CHD8Q9HCK8 2581 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 TRIM64BA6NI03 449 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 ZNF724A8MTY0 619 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 RPL22L1Q6P5R6 122 aaKnown RBP12.98□□□□□ -0.33
CBX3-201ENST00000337620 FAM180AQ6UWF9 173 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 ZNF679Q8IYX0 411 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 OR52N5Q8NH56 324 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 TRMT61AQ96FX7 289 aaKnown RBP12.98□□□□□ -0.33
CBX3-201ENST00000337620 OR8B4Q96RC9 309 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 HDHD5Q9BXW7 423 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 RNF122Q9H9V4 155 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 ST6GALNAC2Q9UJ37 374 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 ZNF175Q9Y473 711 aa12.98□□□□□ -0.33
CBX3-201ENST00000337620 TRBV2A0A0J9YWF9 115 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 PLPP2O43688 288 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 FABP5Q01469 135 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 LINC00303Q3SY05 128 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 DMKNQ6E0U4 476 aaPredicted RBP12.97□□□□□ -0.33
CBX3-201ENST00000337620 GDPGP1Q6ZNW5 385 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 OR2AJ1Q8NGZ0 328 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 TSC22D3Q99576 134 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 SLCO5A1Q9H2Y9 848 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 NELFAQ9H3P2 528 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 CENPMQ9NSP4 180 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 CACNA1AO00555 2505 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 OGG1O15527 345 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 ABHD16AO95870 558 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 WNT11O96014 354 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 FCGR2AP12318 317 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 MSR1P21757 451 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 CDK5R1Q15078 307 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 KCNMB1Q16558 191 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 CCDC58Q4VC31 144 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 TSPO2Q5TGU0 170 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 C22orf42Q6IC83 251 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 LINGO2Q7L985 606 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 ALDH16A1Q8IZ83 802 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 LRRC18Q8N456 261 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 ST7LQ8TDW4 575 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 GHSRQ92847 366 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 GPR137Q96N19 417 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 ASH2LQ9UBL3 628 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 LHFPL6Q9Y693 200 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 ZZEF1O43149 2961 aa12.97□□□□□ -0.33
CBX3-201ENST00000337620 OR14I1A6ND48 311 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 HLA-DPB1P04440 258 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 GDI2P50395 445 aaKnown RBP12.96□□□□□ -0.33
CBX3-201ENST00000337620 ROM1Q03395 351 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 INSL4Q14641 139 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 CEACAM16Q2WEN9 425 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 OR7E24Q6IFN5 339 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 ZNF585AQ6P3V2 769 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 NUFIP2Q7Z417 695 aaKnown RBP12.96□□□□□ -0.33
CBX3-201ENST00000337620 ADGRE4PQ86SQ3 457 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 EGFL6Q8IUX8 553 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 ZNF100Q8IYN0 542 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 CPT1CQ8TCG5 803 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 HSD17B8Q92506 261 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 SMIM19Q96E16 107 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 MAP6Q96JE9 813 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 ZNF416Q9BWM5 594 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 DCSTAMPQ9H295 470 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 C1orf198Q9H425 327 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 C12orf49Q9H741 205 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 GPR35Q9HC97 309 aa12.96□□□□□ -0.33
CBX3-201ENST00000337620 TXNL4BQ9NX01 149 aaKnown RBP12.96□□□□□ -0.33
CBX3-201ENST00000337620 GDF2Q9UK05 429 aaPredicted RBP12.96□□□□□ -0.33
CBX3-201ENST00000337620 DSPP15924 2871 aaKnown RBP12.96□□□□□ -0.34
CBX3-201ENST00000337620 SVILO95425 2214 aa12.96□□□□□ -0.34
CBX3-201ENST00000337620 MED19A0JLT2 244 aaPredicted RBP12.95□□□□□ -0.34
CBX3-201ENST00000337620 CD8B2A6NJW9 211 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 CD8BP10966 210 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 SERPINB10P48595 397 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 TGM4P49221 684 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 RIDAP52758 137 aaKnown RBP12.95□□□□□ -0.34
CBX3-201ENST00000337620 NANOS3P60323 173 aaKnown RBP12.95□□□□□ -0.34
CBX3-201ENST00000337620 ROR2Q01974 943 aaKnown RBP12.95□□□□□ -0.34
CBX3-201ENST00000337620 RIPPLY2Q5TAB7 128 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 USP43Q70EL4 1123 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.95□□□□□ -0.34
CBX3-201ENST00000337620 CISD2Q8N5K1 135 aaKnown RBP12.95□□□□□ -0.34
CBX3-201ENST00000337620 KBTBD8Q8NFY9 601 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 RNF166Q96A37 237 aaPredicted RBP12.95□□□□□ -0.34
CBX3-201ENST00000337620 NABP1Q96AH0 204 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 APH1AQ96BI3 265 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 SLAMF6Q96DU3 332 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 PGLYRP3Q96LB9 341 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 DCLRE1CQ96SD1 692 aaKnown RBP12.95□□□□□ -0.34
CBX3-201ENST00000337620 PDCD1LG2Q9BQ51 273 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 SLC7A10Q9NS82 523 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 CLCF1Q9UBD9 225 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 LRP12Q9Y561 859 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 H2BFMP0C1H6 154 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 LSM6P62312 80 aaKnown RBP12.95□□□□□ -0.34
CBX3-201ENST00000337620 MRPL28Q13084 256 aaKnown RBP12.95□□□□□ -0.34
CBX3-201ENST00000337620 CD200R1LQ6Q8B3 271 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 CFAP77Q6ZQR2 320 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 FOXL2NBQ6ZUU3 175 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 FGD2Q7Z6J4 655 aa12.95□□□□□ -0.34
CBX3-201ENST00000337620 UBE2J2Q8N2K1 259 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms