RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CEACAM5P06731 702 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 CARD18P57730 90 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 AKR1C1Q04828 323 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 ZNF266Q14584 549 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 SHEQ5VZ18 495 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 C12orf73Q69YU5 71 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 CORO6Q6QEF8 472 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 LRRC46Q96FV0 321 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 DERL3Q96Q80 235 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 SERTAD4Q9NUC0 356 aa12.55□□□□□ -0.4
RTN4-202ENST00000337526 NXT1Q9UKK6 140 aaKnown RBP12.55□□□□□ -0.4
RTN4-202ENST00000337526 STMND1H3BQB6 276 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 APOBEC1P41238 236 aaKnown RBP12.54□□□□□ -0.4
RTN4-202ENST00000337526 GRB2P62993 217 aaKnown RBP12.54□□□□□ -0.4
RTN4-202ENST00000337526 HTD2P86397 168 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 TLE4Q04727 773 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 NKAIN1Q4KMZ8 207 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 AVPI1Q5T686 147 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 STAC2Q6ZMT1 411 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 RABEPKQ7Z6M1 372 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 CCDC71Q8IV32 467 aaPredicted RBP12.54□□□□□ -0.4
RTN4-202ENST00000337526 LGI3Q8N145 548 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 TMEM217Q8N7C4 229 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 OR11A1Q9GZK7 315 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 FKRPQ9H9S5 495 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 NOSIPQ9Y314 301 aaKnown RBP12.54□□□□□ -0.4
RTN4-202ENST00000337526 KIAA1551Q9HCM1 1747 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 MARF1Q9Y4F3 1742 aaKnown RBP12.54□□□□□ -0.4
RTN4-202ENST00000337526 CD27P26842 260 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 HSF1Q00613 529 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 CATR1Q13166 79 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 NAXDQ8IW45 347 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 YIPF5Q969M3 257 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 PTDSS2Q9BVG9 487 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 AUNIPQ9H7T9 357 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 KCNE3Q9Y6H6 103 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 OR2F2O95006 317 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 SERPINF1P36955 418 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 OR2F1Q13607 317 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 SNTB1Q13884 538 aaKnown RBP12.54□□□□□ -0.4
RTN4-202ENST00000337526 C2orf76Q3KRA6 126 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 VWA2Q5GFL6 755 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 KCNRGQ8N5I3 272 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 SUMF1Q8NBK3 374 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 SLC25A43Q8WUT9 341 aaPredicted RBP12.54□□□□□ -0.4
RTN4-202ENST00000337526 EID2BQ96D98 161 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 ATF6BQ99941 703 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 B3GALT5Q9Y2C3 310 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 CD3DP04234 171 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 GLI4P10075 376 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 ALOX5APP20292 161 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 ENPP1P22413 925 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 DCTDP32321 178 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 HBG1P69891 147 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 HBG2P69892 147 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 EXOSC2Q13868 293 aaKnown RBP12.54□□□□□ -0.4
RTN4-202ENST00000337526 HNF4GQ14541 408 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 SLC25A35Q3KQZ1 300 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 SLC16A12Q6ZSM3 486 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 ZNF683Q8IZ20 524 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 UPRTQ96BW1 309 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 SEH1LQ96EE3 360 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 ARL5BQ96KC2 179 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 KLK11Q9UBX7 282 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 SLC22A13Q9Y226 551 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 PIGLQ9Y2B2 252 aa12.54□□□□□ -0.4
RTN4-202ENST00000337526 OR5H14A6NHG9 310 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 CXCL10P02778 98 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 FGF9P31371 208 aaPredicted RBP12.53□□□□□ -0.4
RTN4-202ENST00000337526 RFX2P48378 723 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 KCNAB1Q14722 419 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 KIRREL2Q6UWL6 708 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 FJX1Q86VR8 437 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 CA13Q8N1Q1 262 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 OR51E1Q8TCB6 317 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 SIGLEC11Q96RL6 698 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 PIGQQ9BRB3 760 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 TUBG2Q9NRH3 451 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 SMCO4Q9NRQ5 59 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 OR51B4Q9Y5P0 310 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 TSTD3H0UI37 97 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 GPR171O14626 319 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 ECI1P42126 302 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 RAB5CP51148 216 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 ATPAF1Q5TC12 328 aaPredicted RBP12.53□□□□□ -0.4
RTN4-202ENST00000337526 CST9LP1Q5W188 147 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 OR10K2Q6IF99 312 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 DOK3Q7L591 496 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 OR1M1Q8NGA1 313 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 SMIM4Q8WVI0 70 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 SLAMF6Q96DU3 332 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 OR2A14Q96R47 310 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 TRAPPC4Q9Y296 219 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 TOGARAM1Q9Y4F4 1720 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 PPP2CBP62714 309 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 PPP2CAP67775 309 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 YBX1P67809 324 aaKnown RBP12.53□□□□□ -0.4
RTN4-202ENST00000337526 ACOT7LQ6ZUV0 252 aa12.53□□□□□ -0.4
RTN4-202ENST00000337526 OR2L13Q8N349 312 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms