RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 HES7Q9BYE0 225 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 ABCG5Q9H222 651 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 EMC3Q9P0I2 261 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 P2RY10O00398 339 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 NDUFS6O75380 124 aaKnown RBP11.24□□□□□ -0.61
LIMK1-201ENST00000336180 SLC43A1O75387 559 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 TRAPPC6AO75865 159 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 SCO1O75880 301 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 MT-ATP6P00846 226 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 ZNF823P16415 610 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 DPP4P27487 766 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 DDOSTP39656 456 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 PITPNBP48739 271 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 DUSP3P51452 185 aaPredicted RBP11.24□□□□□ -0.61
LIMK1-201ENST00000336180 SPOCK1Q08629 439 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 SFRP4Q6FHJ7 346 aaPredicted RBP11.24□□□□□ -0.61
LIMK1-201ENST00000336180 PLET1Q6UQ28 207 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 MINDY2Q8NBR6 621 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 ASB10Q8WXI3 467 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 NKD1Q969G9 470 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 ZC3H10Q96K80 434 aaKnown RBP11.24□□□□□ -0.61
LIMK1-201ENST00000336180 RANGRFQ9HD47 186 aaPredicted RBP11.24□□□□□ -0.61
LIMK1-201ENST00000336180 CYSLTR2Q9NS75 346 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 B3GAT1Q9P2W7 334 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 SULT2B1O00204 365 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 OR2T1O43869 369 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 TACSTD2P09758 323 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 RFPL3SP0C7P2 107 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 RGS19P49795 217 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 GALK2Q01415 458 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 MC2RQ01718 297 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 SPEM2Q0P670 501 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 GPR176Q14439 515 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 OR51D1Q8NGF3 324 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 OR2Y1Q8NGV0 311 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 ZNF486Q96H40 463 aaPredicted RBP11.24□□□□□ -0.61
LIMK1-201ENST00000336180 SDHAF3Q9NRP4 125 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 HPF1Q9NWY4 346 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 KLK11Q9UBX7 282 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 CYB5R1Q9UHQ9 305 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 MOKQ9UQ07 419 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 PCDHGB2Q9Y5G2 931 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 DCHS1Q96JQ0 3298 aa11.24□□□□□ -0.61
LIMK1-201ENST00000336180 DNAJC13O75165 2243 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 ZNF407Q9C0G0 2248 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 ANXA2P2A6NMY6 339 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 KDM4BO94953 1096 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 WDPCPO95876 746 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 ANXA2P07355 339 aaKnown RBP11.23□□□□□ -0.61
LIMK1-201ENST00000336180 HTR3AP46098 478 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 SLC17A1Q14916 467 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 DCAF12Q5T6F0 453 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 AGAP6Q5VW22 663 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 IDO2Q6ZQW0 420 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 RNF144BQ7Z419 303 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 COMMD2Q86X83 199 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 C11orf40Q8WZ69 217 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 IMMP1LQ96LU5 166 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 DOCK7Q96N67 2140 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 AGAP4Q96P64 663 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 PADI1Q9ULC6 663 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 TNFSF11O14788 317 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 APEHP13798 732 aaKnown RBP11.23□□□□□ -0.61
LIMK1-201ENST00000336180 APOBEC1P41238 236 aaKnown RBP11.23□□□□□ -0.61
LIMK1-201ENST00000336180 GLO1Q04760 184 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 IL10RAQ13651 578 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 NTRK2Q16620 822 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 TATDN3Q17R31 274 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 SPINK14Q6IE38 97 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 SLC18B1Q6NT16 456 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 LRRC28Q86X40 367 aaPredicted RBP11.23□□□□□ -0.61
LIMK1-201ENST00000336180 SIAH3Q8IW03 269 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 LRRC18Q8N456 261 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 SYNPRQ8TBG9 265 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 RFT1Q96AA3 541 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 RNF170Q96K19 258 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 C4orf45Q96LM5 186 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 SOSTQ9BQB4 213 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 PLA2G3Q9NZ20 509 aa11.23□□□□□ -0.61
LIMK1-201ENST00000336180 TNRC6BQ9UPQ9 1833 aaKnown RBP11.22□□□□□ -0.61
LIMK1-201ENST00000336180 C5orf63A6NC05 138 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 SERPINA3P01011 423 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 IGHV3-9P01782 118 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 CLDN17P56750 224 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 CLDN20P56880 219 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 CLRN1P58418 232 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 TGIF1Q15583 401 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 Q499Y3 187 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 SLC26A10Q8NG04 563 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 ST8SIA1Q92185 356 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 MARC2Q969Z3 335 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 OR8B4Q96RC9 309 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 COMMD4Q9H0A8 199 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 TAS2R4Q9NYW5 299 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 OR5V1Q9UGF6 321 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 DKKL1Q9UK85 242 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 FKBP7Q9Y680 259 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 V9GY05 133 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 IFITM5A6NNB3 132 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 RGS13O14921 159 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms