RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 POU4F2Q12837 409 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 PCK2Q16822 640 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 TEX30Q5JUR7 227 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 SHFQ7M4L6 423 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 SLC16A9Q7RTY1 509 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 DPY19L4Q7Z388 723 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 C17orf78Q8N4C9 275 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 OR6N2Q8NGY6 317 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 FGFBP3Q8TAT2 258 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 FBXO17Q96EF6 278 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 RHNO1Q9BSD3 238 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 KCNN2Q9H2S1 579 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 SLC17A5Q9NRA2 495 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 MRPS18AQ9NVS2 196 aaKnown RBP12□□□□□ -0.49
TUBA1B-202ENST00000336023 ZNF224Q9NZL3 707 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 ASH2LQ9UBL3 628 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 CYB5R1Q9UHQ9 305 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 KCNG2Q9UJ96 466 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 LRCH1Q9Y2L9 728 aa12□□□□□ -0.49
TUBA1B-202ENST00000336023 A0A1W2PR80 420 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 SLC1A7O00341 560 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 FAM20BO75063 409 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 TMCC2O75069 709 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 RNF224P0DH78 156 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 GRNP28799 593 aaKnown RBP11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 HOXC12P31275 282 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 HCCSP53701 268 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 UBE2NP61088 152 aaKnown RBP11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 TUBA1BP68363 451 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 TUBA4AP68366 448 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 RAB40BQ12829 278 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 KLHL22Q53GT1 634 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 TIMM23BQ5SRD1 257 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 CORO6Q6QEF8 472 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 TUBA1AQ71U36 451 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 LINC00346Q8IVM7 164 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 CCDC36Q8IYA8 594 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 WDR31Q8NA23 367 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 GGHQ92820 318 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 USB1Q9BQ65 265 aaKnown RBP11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 SCN3BQ9NY72 215 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 PSORS1C1Q9UIG5 152 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 EXOGQ9Y2C4 368 aaKnown RBP11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 LHFPL6Q9Y693 200 aa11.99□□□□□ -0.49
TUBA1B-202ENST00000336023 ZNF503-AS2A6NEH8 195 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 CCDC159P0C7I6 412 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 CD79AP11912 226 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 ZNF32P17041 273 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 PCBD1P61457 104 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 PIGFQ07326 219 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 AQP6Q13520 282 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 SLC36A2Q495M3 483 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 SLC18B1Q6NT16 456 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 SYT9Q86SS6 491 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 P2RY8Q86VZ1 359 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 SLC35F2Q8IXU6 374 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 ZNF540Q8NDQ6 660 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 OR2AJ1Q8NGZ0 328 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 OR52N5Q8NH56 324 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 OTOSQ8NHW6 89 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 NANOS1Q8WY41 292 aaKnown RBP11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 YIPF3Q9GZM5 350 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 OR10A4Q9H209 315 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 CCNB1IP1Q9NPC3 277 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 B3GNT2Q9NY97 397 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 TIMM10BQ9Y5J6 103 aa11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 ANKHD1Q8IWZ3 2542 aaKnown RBP11.98□□□□□ -0.49
TUBA1B-202ENST00000336023 ARPC4-TTLL3A0A0A6YYG9 625 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 EFCAB10A6NFE3 127 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 PTGES3LE9PB15 166 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 J3QRE1 110 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 UBL3O95164 117 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 FADS2O95864 444 aaKnown RBP11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 MMP7P09237 267 aaPredicted RBP11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 CRHBPP24387 322 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 RAB1AP62820 205 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 TAB1Q15750 504 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 RBM48Q5RL73 367 aaKnown RBP11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 C22orf34Q6ZV56 151 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 DPPA2Q7Z7J5 298 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 CDC20BQ86Y33 519 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 ZNF454Q8N9F8 522 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 GJC3Q8NFK1 279 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 OR10H4Q8NGA5 316 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 OR52I1Q8NGK6 324 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 SSC4DQ8WTU2 575 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 HSD17B8Q92506 261 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 WACQ9BTA9 647 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 RNF121Q9H920 327 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 OBP2BQ9NPH6 170 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 NPDC1Q9NQX5 325 aaPredicted RBP11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 CNOT2Q9NZN8 540 aaKnown RBP11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 LAMP5Q9UJQ1 280 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 GDF2Q9UK05 429 aaPredicted RBP11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 MYRFQ9Y2G1 1151 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 TPRKBQ9Y3C4 175 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 SLC25A15Q9Y619 301 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 CACNA1CQ13936 2221 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 TENM4Q6N022 2769 aa11.97□□□□□ -0.49
TUBA1B-202ENST00000336023 IRGMA1A4Y4 181 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms