RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 C12orf42Q96LP6 360 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF552Q9H707 407 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 AQP7O14520 342 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 TOX3O15405 576 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 JMJD7P0C870 316 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 SDC1P18827 310 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 GPR12P47775 334 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 KCNJ3P48549 501 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 CASP7P55210 303 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 TCTAP57738 103 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PPP2CAP67775 309 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 DHRS13Q6UX07 377 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 MOB3CQ70IA8 216 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 NAXDQ8IW45 347 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 OR4D10Q8NGI6 311 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 OR2AE1Q8NHA4 323 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 OR10C1Q96KK4 312 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 LOC102724200A0A096LPH7 203 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 A0A1W2PRU2 124 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 A6NL46 340 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 CHRM2P08172 466 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 LIMS3P0CW19 117 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 LIMS4P0CW20 117 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 GPM6AP51674 278 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ATP6V1FQ16864 119 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 RPEL1Q2QD12 228 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 SLC35D3Q5M8T2 416 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 CYHR1Q6ZMK1 362 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 KIAA1958Q8N8K9 716 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 NTMT1Q9BV86 223 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 EMC9Q9Y3B6 208 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PDCD11Q14690 1871 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 RGPD5Q99666 1765 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 UNCXA6NJT0 531 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 TBX19O60806 448 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 HOXB2P14652 356 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 RACK1P63244 317 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 SLC35A1P78382 337 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 LCTLQ6UWM7 567 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 DPY19L2P2Q6ZN68 376 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 BAP18Q8IXM2 172 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 APIPQ96GX9 242 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PARP12Q9H0J9 701 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 SLC35B3Q9H1N7 401 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF256Q9Y2P7 627 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 BMPR1BO00238 502 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF593O00488 134 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ORM1P02763 201 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 BMPR1AP36894 532 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 CSNK1G2P78368 415 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 POU3F1Q03052 451 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 MARCH8Q5T0T0 291 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 THNSL2Q86YJ6 484 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 EMG1Q92979 244 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 RHOFQ9HBH0 211 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 CBLCQ9ULV8 474 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PIGLQ9Y2B2 252 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ANTXRLA6NF34 631 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM11P17152 192 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 POU3F2P20265 443 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 RPL11P62913 178 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 MAT1AQ00266 395 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ALKBH1Q13686 389 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 MBOAT2Q6ZWT7 520 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 OR5AR1Q8NGP9 310 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 OR5K2Q8NHB8 316 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 RTP3Q9BQQ7 232 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 NARFLQ9H6Q4 476 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 CCSO14618 274 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 OR7C2O60412 319 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PPP1R11O60927 126 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 COL5A1-AS1Q5SY13 56 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ADPRHL1Q8NDY3 354 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PIGCQ92535 297 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 LPAR4Q99677 370 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF355PQ9NSJ1 428 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 FLVCR2Q9UPI3 526 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 LRRK1Q38SD2 2015 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 RNASEK-C17orf49H0YIS7 233 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 SMN1Q16637 294 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PRAMEF19Q5SWL8 479 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PRSS42Q7Z5A4 293 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF761Q86XN6 746 aaPredicted RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ATF6BQ99941 703 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 TJP1Q07157 1748 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 IGLV3-22A0A075B6J6 115 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 SLC25A6P12236 298 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 ITGB7P26010 798 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 NOVA1P51513 510 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PCBP4P57723 403 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 SPCS3P61009 180 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 RPS15P62841 145 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 TSEN54Q7Z6J9 526 aaKnown RBP5.7□□□□□ -1.5
CSMD1-201ENST00000335551 OR14A16Q8NHC5 309 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 PEX11GQ96HA9 241 aa5.7□□□□□ -1.5
CSMD1-201ENST00000335551 GALR3O60755 368 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 EXT1Q16394 746 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 PKDCCQ504Y2 493 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF429Q86V71 674 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 MFSD4AQ8N468 514 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms