RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SLC17A2O00624 439 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 SRPX2O60687 465 aaPredicted RBP11.08□□□□□ -0.64
VPS33B-201ENST00000333371 B3GALNT1O75752 331 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 OR6A2O95222 327 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 CD38P28907 300 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 NR0B1P51843 470 aaKnown RBP11.08□□□□□ -0.64
VPS33B-201ENST00000333371 BIKQ13323 160 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 NKPD1Q17RQ9 610 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 LY6G6FQ5SQ64 297 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 TMEM225Q6GV28 225 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 KRT77Q7Z794 578 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 GKN2Q86XP6 184 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 OR1S1Q8NH92 325 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 SCARB1Q8WTV0 552 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 ST8SIA4Q92187 359 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 SEH1LQ96EE3 360 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 MFFQ9GZY8 342 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 ADAM19Q9H013 955 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 PPA2Q9H2U2 334 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 LANCL2Q9NS86 450 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 PRELID1Q9Y255 219 aa11.08□□□□□ -0.64
VPS33B-201ENST00000333371 C2orf72A6NCS6 295 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 CDC40O60508 579 aaKnown RBP eCLIP11.07□□□□□ -0.64
VPS33B-201ENST00000333371 C4BPBP20851 252 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 PPICP45877 212 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 GABRA4P48169 554 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 ARHGDIBP52566 201 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 SKP1P63208 163 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 GK2Q14410 553 aaPredicted RBP11.07□□□□□ -0.64
VPS33B-201ENST00000333371 LIN54Q6MZP7 749 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 RTN4RL2Q86UN3 420 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 LINC00346Q8IVM7 164 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 OR1J2Q8NGS2 313 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 ASB5Q8WWX0 329 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 SLC25A28Q96A46 364 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 CMKLR1Q99788 373 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 NUDT9Q9BW91 350 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 WDR13Q9H1Z4 485 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 DHDHQ9UQ10 334 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 PRSS37A4D1T9 235 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 TMEM235A6NFC5 223 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 HMSDA8MTL9 139 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 RAB3DO95716 219 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 AMY2AP04746 511 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 OR4E1P0C645 316 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 CD27P26842 260 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 FMODQ06828 376 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 EIF2B1Q14232 305 aaKnown RBP11.07□□□□□ -0.64
VPS33B-201ENST00000333371 ATXN7L3Q14CW9 347 aaPredicted RBP11.07□□□□□ -0.64
VPS33B-201ENST00000333371 SCGB2B2Q4G0G5 96 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 ATRAIDQ6UW56 229 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 C16orf47Q6ZP98 133 aaPredicted RBP11.07□□□□□ -0.64
VPS33B-201ENST00000333371 SLC51BQ86UW2 128 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF679Q8IYX0 411 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 BOLLQ8N9W6 283 aaKnown RBP11.07□□□□□ -0.64
VPS33B-201ENST00000333371 GPR119Q8TDV5 335 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 GPX8Q8TED1 209 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 C15orf40Q8WUR7 153 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 CMBLQ96DG6 245 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 SEC22AQ96IW7 307 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 CYYR1Q96J86 154 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 ABHD6Q9BV23 337 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 MRPS17Q9Y2R5 130 aaKnown RBP11.07□□□□□ -0.64
VPS33B-201ENST00000333371 EMC9Q9Y3B6 208 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 LRP12Q9Y561 859 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 TMEM14AQ9Y6G1 99 aa11.07□□□□□ -0.64
VPS33B-201ENST00000333371 H0YIG0 161 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF432O94892 652 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 CAPZBP47756 277 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 SLC22A6Q4U2R8 563 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 VWA2Q5GFL6 755 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 EMC4Q5J8M3 183 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 FAM166AQ6J272 317 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 CD163Q86VB7 1156 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 JAGN1Q8N5M9 183 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF454Q8N9F8 522 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 ADIPOR1Q96A54 375 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 TCTN2Q96GX1 697 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 SLC25A44Q96H78 314 aaPredicted RBP11.06□□□□□ -0.64
VPS33B-201ENST00000333371 MNTQ99583 582 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 MESP1Q9BRJ9 268 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 MED11Q9P086 117 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 COA3Q9Y2R0 106 aaPredicted RBP11.06□□□□□ -0.64
VPS33B-201ENST00000333371 TMEM82A0PJX8 343 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 KCNAB3O43448 404 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 DDAH2O95865 285 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 NME1P15531 152 aaKnown RBP11.06□□□□□ -0.64
VPS33B-201ENST00000333371 CORO6Q6QEF8 472 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 CFAP77Q6ZQR2 320 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 SHISA6Q6ZSJ9 500 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 C9orf40Q8IXQ3 194 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 ACBD4Q8NC06 268 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 RNF128Q8TEB7 428 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 C8orf44Q96CB5 159 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 MICU1Q9BPX6 476 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 SHARPINQ9H0F6 387 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 TAS2R8Q9NYW2 309 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 EPHA6Q9UF33 1036 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 PFDN2Q9UHV9 154 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 FRYLO94915 3013 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms