RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 MCRIP1C9JLW8 97 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 NKPD1Q17RQ9 610 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 COL13A1Q5TAT6 717 aaPredicted RBP12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 SPICQ8N5J4 248 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 PTDSS2Q9BVG9 487 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 RTTNQ86VV8 2226 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 SLC22A23A1A5C7 686 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 SHISA8B8ZZ34 492 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 H3BML4 177 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 SLC17A2O00624 439 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 LMX1BO60663 402 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 POLR2HP52434 150 aaKnown RBP12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 OR7A5Q15622 319 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 GLT8D1Q68CQ7 371 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 RNF128Q8TEB7 428 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 C5orf34Q96MH7 638 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 MNTQ99583 582 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 TXNIPQ9H3M7 391 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 TAS2R8Q9NYW2 309 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 LRP4O75096 1905 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 SNRPGP15A8MWD9 76 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 ALG1L2C9J202 215 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 RAB3DO95716 219 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 AMY2AP04746 511 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 IL5P05113 134 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 CPN1P15169 458 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 HTR2CP28335 458 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 GNALP38405 381 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 SORDQ00796 357 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 GLO1Q04760 184 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 CSRP2Q16527 193 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 WDR45BQ5MNZ6 344 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 ACBD4Q8NC06 268 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 OR2AK2Q8NG84 335 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 FAM46BQ96A09 425 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 NUDT22Q9BRQ3 303 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 EMC6Q9BV81 110 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 VN1R1Q9GZP7 353 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 GPR27Q9NS67 375 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 MED29Q9NX70 200 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 A8MVM7 634 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 F5H5P2 479 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 ZNF28P17035 718 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 SEC61A1P61619 476 aaKnown RBP12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 ASPHD2Q6ICH7 369 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 C17orf107Q6ZR85 190 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 DCXRQ7Z4W1 244 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 CHST4Q8NCG5 386 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 ASB5Q8WWX0 329 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 ARL5BQ96KC2 179 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 FOXQ1Q9C009 403 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 TINAGL1Q9GZM7 467 aaPredicted RBP12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 MBTPS2O43462 519 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 TSPAN2O60636 221 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 LRRC37A5PQ49AS3 106 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 IDO2Q6ZQW0 420 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 ASB17Q8WXJ9 295 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 DHRS9Q9BPW9 319 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 TTYH1Q9H313 450 aaPredicted RBP12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 POFUT1Q9H488 388 aa12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 MRPS18BQ9Y676 258 aaKnown RBP12.62□□□□□ -0.39
ATP2C1-201ENST00000328560 P2RY10O00398 339 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 GALNSP34059 522 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 CD163Q86VB7 1156 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 GABRG1Q8N1C3 465 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 CXorf58Q96LI9 332 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 OPN4Q9UHM6 478 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 FBXL2Q9UKC9 423 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 IGKV3D-11A0A0A0MRZ8 115 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 IGLV1-36A0A0B4J1U3 117 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 TMEM269A0A1B0GVZ9 245 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 TCRBV16S1A1N1A0A5B0 115 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 TMEM235A6NFC5 223 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 NPIPA5E9PKD4 350 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 PLPP3O14495 311 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 EIF4E2O60573 245 aaKnown RBP12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 SPDEFO95238 335 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 IGF2P01344 180 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 RRASP10301 218 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 S100A11P31949 105 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 FBXW4P57775 412 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 POU3F1Q03052 451 aaPredicted RBP12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 SMAD4Q13485 552 aaKnown RBP12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 HLXQ14774 488 aaPredicted RBP12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 TSSK4Q6SA08 328 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 SEZ6L2Q6UXD5 910 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 SLC36A1Q7Z2H8 476 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 OR4S1Q8NGB4 309 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 RBPMSQ93062 196 aaKnown RBP12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 TMEM185BQ9H7F4 350 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 UCK1Q9HA47 277 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 MED11Q9P086 117 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 FBXO4Q9UKT5 387 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 NPIPA1Q9UND3 350 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 LOC101059948A0A1B0GTJ6 334 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 OR2M5A3KFT3 312 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 SHOXO15266 292 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 RP2O75695 350 aa12.61□□□□□ -0.39
ATP2C1-201ENST00000328560 MT-ATP6P00846 226 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms