RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 TCTN3Q6NUS6 607 aa9.96□□□□□ -0.81
SNRNP200-201ENST00000323853 CMTM4Q8IZR5 234 aa9.96□□□□□ -0.81
SNRNP200-201ENST00000323853 LIN37Q96GY3 246 aaPredicted RBP9.96□□□□□ -0.81
SNRNP200-201ENST00000323853 TAF9BQ9HBM6 251 aa9.96□□□□□ -0.81
SNRNP200-201ENST00000323853 HRASLSQ9HDD0 168 aa9.96□□□□□ -0.81
SNRNP200-201ENST00000323853 POM121BA6NF01 834 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 OR6C65A6NJZ3 312 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 THBS3P49746 956 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 BTG2P78543 158 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 RPL18Q07020 188 aaKnown RBP9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 AQP6Q13520 282 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 PHLDA2Q53GA4 152 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 PTCRAQ6ISU1 281 aaPredicted RBP9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 GABRG1Q8N1C3 465 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 IFI44Q8TCB0 444 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 PCDHB10Q9UN67 800 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 FXYD1O00168 92 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 NXPH2O95156 264 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 THEM4Q5T1C6 240 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 HIST2H3PS2Q5TEC6 136 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 OR6K3Q8NGY3 331 aa9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 EMG1Q92979 244 aaKnown RBP9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 UBL7Q96S82 380 aaPredicted RBP9.96□□□□□ -0.82
SNRNP200-201ENST00000323853 BCKDHBP21953 392 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 PPICP45877 212 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 CLINT1Q14677 625 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 AGERQ15109 404 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 AVPI1Q5T686 147 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 LINC00696Q6ZRV3 163 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 SLC30A7Q8NEW0 376 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 PATE1Q8WXA2 126 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 SMIM19Q96E16 107 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 PURGQ9UJV8 347 aaKnown RBP9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 FRG2CA6NGY1 282 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 ZNF705GA8MUZ8 300 aaPredicted RBP9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 SGCEO43556 437 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 CLDN1O95832 211 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 ACKR1Q16570 336 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 PAN3Q58A45 887 aaKnown RBP9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 SPNS1Q9H2V7 528 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 IL21Q9HBE4 155 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 SPNP16150 400 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 RUNX2Q13950 521 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 BATFQ16520 125 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 VHLLQ6RSH7 139 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 LGI3Q8N145 548 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 ANKRD53Q8N9V6 530 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 OR11A1Q9GZK7 315 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 HIPK2Q9H2X6 1198 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 TCEAL2Q9H3H9 227 aaPredicted RBP9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 C12orf49Q9H741 205 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 ANKRD10Q9NXR5 420 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 TSTD3H0UI37 97 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 KLRC4-KLRK1H3BQV0 150 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 CYB5BO43169 146 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 QDPRP09417 244 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 CYB561P49447 251 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 LHFPL2Q6ZUX7 228 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 CCL4L1Q8NHW4 92 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 FYTTD1Q96QD9 318 aaKnown RBP9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 PBX4Q9BYU1 374 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 OR51B4Q9Y5P0 310 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 R4GMQ9 66 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 PAPPA2Q9BXP8 1791 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 DSCR3O14972 297 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 WNT11O96014 354 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 SLC2A1P11166 492 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 ZNF628Q5EBL2 1059 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 C12orf73Q69YU5 71 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 ASTLQ6HA08 431 aaPredicted RBP9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 LIPHQ8WWY8 451 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 YIPF5Q969M3 257 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 CSAG2Q9Y5P2 127 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 CEACAM5P06731 702 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 C6orf15Q6UXA7 325 aaPredicted RBP9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 GLCCI1Q86VQ1 547 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 TMEM217Q8N7C4 229 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 ZCCHC4Q9H5U6 513 aa9.95□□□□□ -0.82
SNRNP200-201ENST00000323853 RAB19A4D1S5 217 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 PRSS37A4D1T9 235 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 ST6GAL1P15907 406 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 CAPZBP47756 277 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 EVX1P49640 407 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 RAB11AP62491 216 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 EMC6Q9BV81 110 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 BCO1Q9HAY6 547 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 CDK5RAP2Q96SN8 1893 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 CDK5R1Q15078 307 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 PRSS36Q5K4E3 855 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 C16orf52Q8NHV5 167 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 DDOQ99489 341 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 RHNO1Q9BSD3 238 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 SLC22A11Q9NSA0 550 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 SLC39A9Q9NUM3 307 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 SH3BGRL2Q9UJC5 107 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 B3GALT5Q9Y2C3 310 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 A0A0B4J203 849 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 STMND1H3BQB6 276 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 DEGS1O15121 323 aa9.94□□□□□ -0.82
SNRNP200-201ENST00000323853 TPPPO94811 219 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms