RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 RPS15P62841 145 aaKnown RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 HABP2Q14520 560 aaPredicted RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 TMEM225Q6GV28 225 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 DNM1P34Q6PK57 102 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 TMEM184AQ6ZMB5 413 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 DBX2Q6ZNG2 339 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 RXFP4Q8TDU9 374 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 C2CD4CQ8TF44 421 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SRA1Q9HD15 236 aaKnown RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 MMP25Q9NPA2 562 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SUSD2Q9UGT4 822 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 PCDHGA1Q9Y5H4 931 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 MYLKQ15746 1914 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 EFSO43281 561 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 IFNA21P01568 189 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 CPT2P23786 658 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 RBMXP38159 391 aaKnown RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 FAM3AP98173 230 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 TDGQ13569 410 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 MELKQ14680 651 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 OR9K2Q8NGE7 335 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 CD99L2Q8TCZ2 262 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 C2orf50Q96LR7 162 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 PAPOLGQ9BWT3 736 aaKnown RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SRMSQ9H3Y6 488 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 ELOVL3Q9HB03 270 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 GTF2A1LQ9UNN4 478 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 KCNK6Q9Y257 313 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 CSAG2Q9Y5P2 127 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 WNT6Q9Y6F9 365 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 WDR90Q96KV7 1748 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 BTBD17A6NE02 478 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SPARCP09486 303 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 PTNP21246 168 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 CD80P33681 288 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 PPT1P50897 306 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 KLHL26Q53HC5 615 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 BEX5Q5H9J7 111 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 GLYATL3Q5SZD4 288 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 RHOUQ7L0Q8 258 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SLC16A13Q7RTY0 426 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 OR4N5Q8IXE1 308 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 METTL21AQ8WXB1 218 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 ZFYVE21Q9BQ24 234 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 STRAPQ9Y3F4 350 aaKnown RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 A0A1W2PPC1 479 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 FIGNL2A6NMB9 653 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 TNFSF14O43557 240 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 FARS2O95363 451 aaKnown RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 ITGA5P08648 1049 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SMIM10L1P0DMW3 83 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 LAP3P28838 519 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SERPINF1P36955 418 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 ECI1P42126 302 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 GUCA2AQ02747 115 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 MEP1BQ16820 701 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 OOSP2Q86WS3 158 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SLC25A28Q96A46 364 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SMIM10Q96HG1 83 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 OR2A5Q96R48 311 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 LMAN1LQ9HAT1 526 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 KCNJ16Q9NPI9 418 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 OR2S2Q9NQN1 319 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 FARSAQ9Y285 508 aaKnown RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 OR6C76A6NM76 312 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 C4orf51C9J302 202 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 FGF17O60258 216 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 DOK2O60496 412 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SEC11BP0C7V7 166 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 TMIGD3P0DMS9 266 aaPredicted RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SLC2A1P11166 492 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 CXCR1P25024 350 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 HSD11B1P28845 292 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 PMPCAQ10713 525 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 RUNX2Q13950 521 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 NR0B2Q15466 257 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF74Q16587 644 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 VAX1Q5SQQ9 334 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 HIST2H3PS2Q5TEC6 136 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 RTL6Q6ICC9 239 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 Q7L0L9 218 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 C1QL4Q86Z23 238 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 CHST4Q8NCG5 386 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 OR2M4Q96R27 311 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 TOLLIPQ9H0E2 274 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 HRH4Q9H3N8 390 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 FKRPQ9H9S5 495 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 RPS10P5Q9NQ39 176 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 CENPVL1A0A0U1RR11 272 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 A0A1W2PS29 197 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 C7orf77A4D0Y5 90 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 ARGFXA6NJG6 315 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 RAB27BO00194 218 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CLDN4O14493 209 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 LILRB3O75022 631 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 MT-ATP6P00846 226 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 SERPINA5P05154 406 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 FCGR3AP08637 254 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF28P17035 718 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CRABP1P29762 137 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms