RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 OR8J3Q8NGG0 315 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 TFGQ92734 400 aaPredicted RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 TESCQ96BS2 214 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ITCHQ96J02 903 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 CGREF1Q99674 301 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 TBCDQ9BTW9 1192 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 EFCAB11Q9BUY7 163 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 SLC17A9Q9BYT1 436 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 PCBD2Q9H0N5 130 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 PARLQ9H300 379 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 EHD1Q9H4M9 534 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 CLMPQ9H6B4 373 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 C8orf33Q9H7E9 229 aaPredicted RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 GORASP2Q9H8Y8 452 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 GPN2Q9H9Y4 310 aaPredicted RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ZDHHC4Q9NPG8 344 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ARMC1Q9NVT9 282 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 FBXL12Q9NXK8 326 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 AHSPQ9NZD4 102 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 MBD2Q9UBB5 411 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ASF1AQ9Y294 204 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 EXOGQ9Y2C4 368 aaKnown RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 CEP350Q5VT06 3117 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 C2orf16Q68DN1 1984 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 TRGV8A0A0C4DH27 118 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 DHRS12A0PJE2 317 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 EVPLLA8MZ36 301 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 E7EQ34 232 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 FXYD1O00168 92 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 FOXE1O00358 373 aaPredicted RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 EFNA2O43921 213 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 SLC35G4P0C7Q5 338 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 RPA2P15927 270 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 HOXB6P17509 224 aaKnown RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 FASP25445 335 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 GSK3BP49841 420 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ACTR1AP61163 376 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 HNRNPA0Q13151 305 aaKnown RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 DDX39BQ13838 428 aaKnown RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 CYP51A1Q16850 503 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 CCSMST1Q4G0I0 132 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF658BQ4V348 819 aaPredicted RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 SPIN4Q56A73 249 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 FAM219BQ5XKK7 198 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 DOK6Q6PKX4 331 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF329Q86UD4 541 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF547Q8IVP9 402 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 Q8NBF4 154 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 OR52J3Q8NH60 311 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 FBXO30Q8TB52 745 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 SPPL2AQ8TCT8 520 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 GIPC3Q8TF64 312 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 SLC5A11Q8WWX8 675 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 GTF2H4Q92759 462 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 WDR34Q96EX3 536 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 GABRG3Q99928 467 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ST6GALNAC5Q9BVH7 336 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 UGT2B28Q9BY64 529 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 OR52A5Q9H2C5 316 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 CRLF2Q9HC73 371 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 C8orf4Q9NR00 106 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 PURGQ9UJV8 347 aaKnown RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 RAB26Q9ULW5 256 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 SLC9A8Q9Y2E8 581 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 LOC105371242A0A075B767 164 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 A0A096LPI6 279 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 GNG14A0A1W2PPG7 69 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 TXNDC9O14530 226 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 RFXANKO14593 260 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 DENRO43583 198 aaKnown RBP3.28□□□□□ -1.88
SMCO3-201ENST00000316048 SCELO95171 688 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 KLF8O95600 359 aaPredicted RBP3.28□□□□□ -1.88
SMCO3-201ENST00000316048 SDC1P18827 310 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 IDSP22304 550 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 SERPINB1P30740 379 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 SAA4P35542 130 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 AQP4P55087 323 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 ERVK-16P61578 105 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 TBPL1P62380 186 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF85Q03923 595 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 CHRNB3Q05901 458 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 HTR4Q13639 388 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 IRF4Q15306 451 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 SFT2D3Q587I9 215 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF311Q5JNZ3 666 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 EOGTQ5NDL2 527 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 MUC21Q5SSG8 566 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 CPTPQ5TA50 214 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 ANXA8L1Q5VT79 327 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 ATRAIDQ6UW56 229 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 VASH2Q86V25 355 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 HORMAD1Q86X24 394 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 KRTCAP2Q8N6L1 136 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 ANKFN1Q8N957 763 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 DENND6BQ8NEG7 585 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 OR5K2Q8NHB8 316 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 CLHC1Q8NHS4 586 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 CANT1Q8WVQ1 401 aa3.28□□□□□ -1.88
SMCO3-201ENST00000316048 NEIL2Q969S2 332 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms