RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 A0A0A6YYD5 115 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 TMIGD2Q96BF3 282 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 OR14A2Q96R54 314 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 KCNJ16Q9NPI9 418 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 MLXQ9UH92 298 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 HOXD12P35452 270 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 CD79BP40259 229 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 SNRPD2P62316 118 aaKnown RBP12.27□□□□□ -0.45
RFFL-201ENST00000315249 EMX1Q04741 257 aaPredicted RBP12.27□□□□□ -0.45
RFFL-201ENST00000315249 C6orf183Q5T699 404 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 KCNG3Q8TAE7 436 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 SLC7A13Q8TCU3 470 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 TCFL5Q9UL49 500 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 GPRIN2O60269 458 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 CYCSP99999 105 aaKnown RBP12.27□□□□□ -0.45
RFFL-201ENST00000315249 XKR7Q5GH72 579 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 OR1J1Q8NGS3 322 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 OR51E1Q8TCB6 317 aa12.27□□□□□ -0.45
RFFL-201ENST00000315249 A0A0U1RQK1 487 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 LILRB5O75023 590 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 PEX11BO96011 259 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 HOXB3P14651 431 aaPredicted RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 CDAP32320 146 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 RAB4BP61018 213 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 GALEQ14376 348 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 RHEBQ15382 184 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 GDPGP1Q6ZNW5 385 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 BHLHA9Q7RTU4 235 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 LINC01555Q8NAE3 123 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 FAM60AQ9NP50 221 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 ZFP57Q9NU63 452 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 KIAA1456Q9P272 454 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 MAB21L2Q9Y586 359 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 ANKRD61A6NGH8 418 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 HOXC4P09017 264 aaPredicted RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 BCL2A1Q16548 175 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 ARIH2OSQ8N7S6 290 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 UPRTQ96BW1 309 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 TINAGL1Q9GZM7 467 aaPredicted RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 RGCCQ9H4X1 137 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 CGGBP1Q9UFW8 167 aaPredicted RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 CACNG2Q9Y698 323 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 BHLHE40O14503 412 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 PPIHO43447 177 aaKnown RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 CLEC3BP05452 202 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 SHC1P29353 583 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 GABRA5P31644 462 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 MNX1P50219 401 aaPredicted RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 TAS2R19P59542 299 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 CAMK2BQ13554 666 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 CEACAM16Q2WEN9 425 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 SLC35D3Q5M8T2 416 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 DNAJC22Q8N4W6 341 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 TSSK2Q96PF2 358 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 SMIM3Q9BZL3 60 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 ANKUB1A6NFN9 424 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 SH2D1BO14796 132 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 ARPC1BO15143 372 aaKnown RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 SOX18P35713 384 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 NFATC3Q12968 1075 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 ABI3BPQ7Z7G0 1075 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 RBMXL3Q8N7X1 1067 aaKnown RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 OR10K1Q8NGX5 313 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 ZC3H10Q96K80 434 aaKnown RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 PDCD1LG2Q9BQ51 273 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 ABHD6Q9BV23 337 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 MBD1Q9UIS9 605 aaPredicted RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 B3GALT5Q9Y2C3 310 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 LAP3P28838 519 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 POU4F3Q15319 338 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 OR51F2Q8NH61 342 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 AKR7LQ8NHP1 331 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 BORCS7Q96B45 105 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 LRRC3BQ96PB8 259 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 GPR87Q9BY21 358 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 SIRPB1O00241 398 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 PRICKLE3O43900 615 aaPredicted RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 SLC2A10O95528 541 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 PDLIM3Q53GG5 364 aaPredicted RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 CCBE1Q6UXH8 406 aaPredicted RBP12.26□□□□□ -0.45
RFFL-201ENST00000315249 WDR5BQ86VZ2 330 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 GDPD1Q8N9F7 314 aa12.26□□□□□ -0.45
RFFL-201ENST00000315249 ADAMTS7Q9UKP4 1686 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 CXorf51AA0A1B0GTR3 108 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 A0A1W2PPC1 479 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 GAPDHSO14556 408 aaPredicted RBP12.25□□□□□ -0.45
RFFL-201ENST00000315249 CDC14BO60729 498 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 SC5DO75845 299 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 PCSK6P29122 969 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 DIO1P49895 249 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 NRIP3Q9NQ35 241 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 MTCL1Q9Y4B5 1905 aaKnown RBP12.25□□□□□ -0.45
RFFL-201ENST00000315249 OR2A25A4D2G3 310 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 RPS25P62851 125 aaKnown RBP12.25□□□□□ -0.45
RFFL-201ENST00000315249 HEPHL1Q6MZM0 1159 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 GLIPR1L1Q6UWM5 242 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 TMEM99Q8N816 258 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 OR2Z1Q8NG97 314 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 ADAMTS14Q8WXS8 1223 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 ESRP2Q9H6T0 727 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms