RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 SMARCD3Q6STE5 483 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 ZNF620Q6ZNG0 422 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 RRM2BQ7LG56 351 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 SYT9Q86SS6 491 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 ZDHHC21Q8IVQ6 265 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 YIPF5Q969M3 257 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 MARS2Q96GW9 593 aaKnown RBP12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 TSSK2Q96PF2 358 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 PIMREGQ9BSJ6 248 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 NUAK2Q9H093 628 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 CDH20Q9HBT6 801 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 DYNLRB1Q9NP97 96 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 CCNB1IP1Q9NPC3 277 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 TAS2R1Q9NYW7 299 aa12.48□□□□□ -0.41
PPP1CA-201ENST00000312989 IGLV1-36A0A0B4J1U3 117 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 IQCMA0A1B0GVH7 501 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 KIAA1324LA8MWY0 1029 aaPredicted RBP12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 VSTM5A8MXK1 200 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 SOCS2O14508 198 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 ACOT8O14734 319 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 ARPC3O15145 178 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 GPANK1O95872 356 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 NGFP01138 241 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 PTHP01270 115 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 NAT2P11245 290 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 ZNF16P17020 682 aaPredicted RBP12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 IL2RGP31785 369 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 MPV17P39210 176 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 HSF2Q03933 536 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 PLP2Q04941 152 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 TRIP10Q15642 601 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 KCNMB1Q16558 191 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 ADCK1Q86TW2 530 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 ARHGAP24Q8N264 748 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 OR9Q2Q8NGE9 314 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 OR1J2Q8NGS2 313 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 FANK1Q8TC84 345 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 CLPTM1LQ96KA5 538 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 DDOQ99489 341 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 BCL2L14Q9BZR8 327 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 DUSP13Q9UII6 198 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 COA3Q9Y2R0 106 aaPredicted RBP12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 TIMM10BQ9Y5J6 103 aa12.47□□□□□ -0.41
PPP1CA-201ENST00000312989 C5orf49A4QMS7 147 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 OR10H3O60404 316 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 SLC16A7O60669 478 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 IGHV3-13P01766 116 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 ZNF23P17027 643 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 COL8A2P25067 703 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 APLNRP35414 380 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 MAGEB1P43366 347 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 MMP15P51511 669 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 MNAT1P51948 309 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 SMIM11AP58511 58 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 HIST1H3AP68431 136 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 MXRA7P84157 204 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 TSPAN31Q12999 210 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 TRIM25Q14258 630 aaKnown RBP12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 GGTLC2Q14390 218 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 ALKBH6Q3KRA9 238 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 ZNF362Q5T0B9 420 aaPredicted RBP12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 HIST2H3PS2Q5TEC6 136 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 HIST2H3AQ71DI3 136 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 VASH1Q7L8A9 365 aaPredicted RBP12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 HIPK1Q86Z02 1210 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 OR8D4Q8NGM9 314 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 OR1J1Q8NGS3 322 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 UBASH3BQ8TF42 649 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 C11orf40Q8WZ69 217 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 MSI2Q96DH6 328 aaKnown RBP12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 SNX18Q96RF0 628 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 PLA2G12AQ9BZM1 189 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 RACGAP1Q9H0H5 632 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 C1orf21Q9H246 121 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 MS4A5Q9H3V2 200 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 POFUT1Q9H488 388 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 TAAR3PQ9P1P4 343 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 AURKCQ9UQB9 309 aa12.46□□□□□ -0.41
PPP1CA-201ENST00000312989 LRP5LA4QPB2 252 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 OR6C6A6NF89 314 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 C12orf71A8MTZ7 269 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 C17orf100A8MU93 164 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 XKRYO14609 159 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 TP53P04637 393 aaPredicted RBP12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 COX5BP10606 129 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 HIST1H1CP16403 213 aaKnown RBP12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 RAD52P43351 418 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 KLF3P57682 345 aaPredicted RBP12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 PPP2R2BQ00005 443 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 PPP1R8Q12972 351 aaKnown RBP12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 CCDC92Q53HC0 331 aaPredicted RBP12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 MTX3Q5HYI7 312 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 SPATA46Q5T0L3 261 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 MBNL2Q5VZF2 373 aaKnown RBP12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 OR6V1Q8N148 313 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 SYNPRQ8TBG9 265 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 SLC25A40Q8TBP6 338 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 IPCEF1Q8WWN9 437 aaPredicted RBP12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 MCUR1Q96AQ8 359 aa12.45□□□□□ -0.42
PPP1CA-201ENST00000312989 C1orf159Q96HA4 380 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms