RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 S100PBPQ96BU1 408 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 FOXB1Q99853 325 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 TAS2R16Q9NYV7 291 aa15.94■□□□□ 0.14
HMGA1-201ENST00000311487 DOPEY1Q5JWR5 2465 aa15.93■□□□□ 0.14
HMGA1-201ENST00000311487 IGLV1-36A0A0B4J1U3 117 aa15.93■□□□□ 0.14
HMGA1-201ENST00000311487 ZNF503-AS2A6NEH8 195 aa15.93■□□□□ 0.14
HMGA1-201ENST00000311487 ENTPD6O75354 484 aa15.93■□□□□ 0.14
HMGA1-201ENST00000311487 PAICSP22234 425 aaKnown RBP15.93■□□□□ 0.14
HMGA1-201ENST00000311487 CCKARP32238 428 aa15.93■□□□□ 0.14
HMGA1-201ENST00000311487 SYT6Q5T7P8 510 aaPredicted RBP15.93■□□□□ 0.14
HMGA1-201ENST00000311487 XKRXQ6PP77 449 aa15.93■□□□□ 0.14
HMGA1-201ENST00000311487 SLC16A12Q6ZSM3 486 aa15.93■□□□□ 0.14
HMGA1-201ENST00000311487 FGFBP3Q8TAT2 258 aa15.93■□□□□ 0.14
HMGA1-201ENST00000311487 NMNAT2Q9BZQ4 307 aa15.93■□□□□ 0.14
HMGA1-201ENST00000311487 WDR76Q9H967 626 aa15.93■□□□□ 0.14
HMGA1-201ENST00000311487 MPZL2O60487 215 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 CDK1P06493 297 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 MRPL3P09001 348 aaKnown RBP15.92■□□□□ 0.14
HMGA1-201ENST00000311487 UGT2B10P36537 528 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 ASCL1P50553 236 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 HCCSP53701 268 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 TFF3Q07654 80 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 DYNC1I2Q13409 638 aaKnown RBP15.92■□□□□ 0.14
HMGA1-201ENST00000311487 BHLHA15Q7RTS1 189 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-201ENST00000311487 FAM26EQ8N5C1 309 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 LINC01560Q8TB33 94 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 NELFAQ9H3P2 528 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 ENPP5Q9UJA9 477 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 OR6C65A6NJZ3 312 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 KHDRBS3O75525 346 aaKnown RBP15.92■□□□□ 0.14
HMGA1-201ENST00000311487 HLA-HP01893 362 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 TFP02787 698 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 PSKH1P11801 424 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 IL32P24001 234 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 LAP3P28838 519 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 CD79BP40259 229 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 ZNF84P51523 738 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 CORO6Q6QEF8 472 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 SHFQ7M4L6 423 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 ZBTB46Q86UZ6 589 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 ANKRD13BQ86YJ7 626 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 SKA3Q8IX90 412 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 OR8J1Q8NGP2 316 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 OR1K1Q8NGR3 316 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 OR2T4Q8NH00 348 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 MYDGFQ969H8 173 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 ZNF582Q96NG8 517 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-201ENST00000311487 PRRG3Q9BZD7 231 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 ACTR6Q9GZN1 396 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 NPDC1Q9NQX5 325 aaPredicted RBP15.92■□□□□ 0.14
HMGA1-201ENST00000311487 TMEM38BQ9NVV0 291 aa15.92■□□□□ 0.14
HMGA1-201ENST00000311487 RPL36A-HNRNPH2H7BZ11 118 aa15.91■□□□□ 0.14
HMGA1-201ENST00000311487 COX5AP20674 150 aa15.91■□□□□ 0.14
HMGA1-201ENST00000311487 CRABP1P29762 137 aa15.91■□□□□ 0.14
HMGA1-201ENST00000311487 C21orf33P30042 268 aaPredicted RBP15.91■□□□□ 0.14
HMGA1-201ENST00000311487 GABRA6Q16445 453 aa15.91■□□□□ 0.14
HMGA1-201ENST00000311487 C10orf128Q5T292 105 aa15.91■□□□□ 0.14
HMGA1-201ENST00000311487 ABHD12BQ7Z5M8 362 aaPredicted RBP15.91■□□□□ 0.14
HMGA1-201ENST00000311487 LINC00346Q8IVM7 164 aa15.91■□□□□ 0.14
HMGA1-201ENST00000311487 GLB1L2Q8IW92 636 aa15.91■□□□□ 0.14
HMGA1-201ENST00000311487 SLC22A24Q8N4F4 322 aa15.91■□□□□ 0.14
HMGA1-201ENST00000311487 SSC4DQ8WTU2 575 aa15.91■□□□□ 0.14
HMGA1-201ENST00000311487 YIPF6Q96EC8 236 aa15.91■□□□□ 0.14
HMGA1-201ENST00000311487 H2AFY2Q9P0M6 372 aaPredicted RBP15.91■□□□□ 0.14
HMGA1-201ENST00000311487 WIPF3A6NGB9 483 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 C16orf97H3BN30 126 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 SELENOFO60613 162 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 LCKP06239 509 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 PSMB9P28065 219 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 NAA10P41227 235 aaPredicted RBP15.9■□□□□ 0.14
HMGA1-201ENST00000311487 SNRPGP62308 76 aaKnown RBP15.9■□□□□ 0.14
HMGA1-201ENST00000311487 P2RY6Q15077 328 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 LINC01590Q5TEZ4 76 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 AADACL4Q5VUY2 407 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 UBE2UQ5VVX9 321 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 C11orf40Q8WZ69 217 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 NABP1Q96AH0 204 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 TEAD3Q99594 435 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 MRPL22Q9NWU5 206 aaKnown RBP15.9■□□□□ 0.14
HMGA1-201ENST00000311487 CLN6Q9NWW5 311 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 FKBP7Q9Y680 259 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 CENPBD1B2RD01 187 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 CNOT4O95628 575 aaKnown RBP15.9■□□□□ 0.14
HMGA1-201ENST00000311487 CD79AP11912 226 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 SLC2A5P22732 501 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 GLO1Q04760 184 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 TBCEQ15813 527 aaPredicted RBP15.9■□□□□ 0.14
HMGA1-201ENST00000311487 TBRG1Q3YBR2 411 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 DRAXINQ8NBI3 349 aaPredicted RBP15.9■□□□□ 0.14
HMGA1-201ENST00000311487 BCL2L2Q92843 193 aaPredicted RBP15.9■□□□□ 0.14
HMGA1-201ENST00000311487 ZNF416Q9BWM5 594 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 TTTY10Q9BZA0 68 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 ELOVL5Q9NYP7 299 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 RTTNQ86VV8 2226 aa15.9■□□□□ 0.14
HMGA1-201ENST00000311487 CCDC182A6NF36 153 aa15.89■□□□□ 0.13
HMGA1-201ENST00000311487 GABARAPO95166 117 aa15.89■□□□□ 0.13
HMGA1-201ENST00000311487 GUCA1AP43080 201 aaPredicted RBP15.89■□□□□ 0.13
HMGA1-201ENST00000311487 SLC25A1P53007 311 aa15.89■□□□□ 0.13
HMGA1-201ENST00000311487 CDH11P55287 796 aa15.89■□□□□ 0.13
HMGA1-201ENST00000311487 TGFBR3Q03167 851 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms