RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 LPAR6P43657 344 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 CSNK1EP49674 416 aaKnown RBP16.32■□□□□ 0.2
SPSB4-201ENST00000310546 SEC13P55735 322 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 EIF2B1Q14232 305 aaKnown RBP16.32■□□□□ 0.2
SPSB4-201ENST00000310546 LYG2Q86SG7 212 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 RASD2Q96D21 266 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 CACFD1Q9UGQ2 172 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 KCNE5Q9UJ90 142 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 TMED7Q9Y3B3 224 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 SCN2AQ99250 2005 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 ARG1P05089 322 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 AWAT1Q58HT5 328 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 TMEM244Q5VVB8 128 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 OR2L2Q8NH16 312 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 OR5K2Q8NHB8 316 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 MS4A6EQ96DS6 147 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 C14orf144Q96I85 54 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 OCSTAMPQ9BR26 566 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 SERTAD3Q9UJW9 196 aa16.32■□□□□ 0.2
SPSB4-201ENST00000310546 C4orf47A7E2U8 309 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 SLC34A2O95436 690 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 CRHP06850 196 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 VASPP50552 380 aaPredicted RBP16.31■□□□□ 0.2
SPSB4-201ENST00000310546 RIDAP52758 137 aaKnown RBP16.31■□□□□ 0.2
SPSB4-201ENST00000310546 FHL1Q13642 323 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 PPP1R3BQ86XI6 285 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 ZSCAN4Q8NAM6 433 aaPredicted RBP16.31■□□□□ 0.2
SPSB4-201ENST00000310546 KIRREL1Q96J84 757 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 FN3KRPQ9HA64 309 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 CAPN10Q9HC96 672 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 PRDM7Q9NQW5 492 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 DOCK9Q9BZ29 2069 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 PLXNA2O75051 1894 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 TBC1D3KA0A087X1G2 549 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 IGKV1-8A0A0C4DH67 115 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 A0A1W2PPV9 198 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 C9orf170A2RU37 121 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 C7orf77A4D0Y5 90 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 MSGN1A6NI15 193 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 NPIPB9F8W1W9 429 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 LRP3O75074 770 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 C6P13671 934 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 NID1P14543 1247 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 CSRP1P21291 193 aaKnown RBP16.31■□□□□ 0.2
SPSB4-201ENST00000310546 ZBTB25P24278 435 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 BCL6P41182 706 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 RPS27P42677 84 aaKnown RBP16.31■□□□□ 0.2
SPSB4-201ENST00000310546 ABHD17CQ6PCB6 329 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 TMEM229BQ8NBD8 167 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 PLPP7Q8NBV4 271 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 ADAD1Q96M93 576 aaKnown RBP16.31■□□□□ 0.2
SPSB4-201ENST00000310546 ZNF681Q96N22 645 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 SYT4Q9H2B2 425 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 ADAP2Q9NPF8 381 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 TM7SF3Q9NS93 570 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 RXFP3Q9NSD7 469 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 SLC23A2Q9UGH3 650 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 KLHDC2Q9Y2U9 406 aa16.31■□□□□ 0.2
SPSB4-201ENST00000310546 CXorf51AA0A1B0GTR3 108 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 ELOA3DA6NLF2 546 aaPredicted RBP16.3■□□□□ 0.2
SPSB4-201ENST00000310546 HNRNPA1P09651 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
SPSB4-201ENST00000310546 TACSTD2P09758 323 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 RAB5CP51148 216 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 NAAAQ02083 359 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 ELOCQ15369 112 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 ARHGAP11BQ3KRB8 267 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 ELOA3BQ3SY89 546 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 DRAM2Q6UX65 266 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 LINC01555Q8NAE3 123 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 ELOA3Q8NG57 546 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 ZNF417Q8TAU3 575 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 ROBO4Q8WZ75 1007 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 FGF14Q92915 247 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 S100PBPQ96BU1 408 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 MRGPRX3Q96LB0 322 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 ASB16Q96NS5 453 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 PIGQQ9BRB3 760 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 MRPS33Q9Y291 106 aaKnown RBP16.3■□□□□ 0.2
SPSB4-201ENST00000310546 TBC1D3FA6NER0 549 aaPredicted RBP16.3■□□□□ 0.2
SPSB4-201ENST00000310546 NDUFB2O95178 105 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 ZNF735P0CB33 412 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 SERPINF1P36955 418 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 TBC1D3GQ6DHY5 549 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 NPEPL1Q8NDH3 523 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 MITD1Q8WV92 249 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 DCAF16Q9NXF7 216 aa16.3■□□□□ 0.2
SPSB4-201ENST00000310546 MRM2Q9UI43 246 aaKnown RBP16.3■□□□□ 0.2
SPSB4-201ENST00000310546 FITM1A5D6W6 292 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 NDUFB7P17568 137 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 CCKBRP32239 447 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 PARM1Q6UWI2 310 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 RPS4Y2Q8TD47 263 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 TSEN15Q8WW01 171 aaKnown RBP16.29■□□□□ 0.2
SPSB4-201ENST00000310546 A0A1B0GWA3 101 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 MFNGO00587 321 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 UPK3AO75631 287 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 DBIP07108 87 aaKnown RBP16.29■□□□□ 0.2
SPSB4-201ENST00000310546 THBS1P07996 1170 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 MAOAP21397 527 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 GSK3AP49840 483 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms