RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SLC41A2Q96JW4 573 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 CRB3Q9BUF7 120 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 ALX4Q9H161 411 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-201ENST00000309017 CHMP1AQ9HD42 196 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-201ENST00000309017 ARPC4-TTLL3A0A0A6YYG9 625 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 METTL21EPA6NDL7 271 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 SCDO00767 359 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 APOC1P02654 83 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 VEGFBP49765 207 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 B2MP61769 119 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 MGAT2Q10469 447 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 PMPCAQ10713 525 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 ELOCQ15369 112 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 ZNF74Q16587 644 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 WBP2NLQ6ICG8 309 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 OR4K17Q8NGC6 315 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 ZNF587Q96SQ5 575 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-201ENST00000309017 PRRT1Q99946 306 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 PILRAQ9UKJ1 303 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 TBX21Q9UL17 535 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 A0A1B0GTQ1 180 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 SLC16A7O60669 478 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 GLAP06280 429 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 SMIM10L1P0DMW3 83 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 PNMTP11086 282 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 S1PR1P21453 382 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 GJA4P35212 333 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 KIR3DL2P43630 455 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 KCNJ3P48549 501 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 RIDAP52758 137 aaKnown RBP10.08□□□□□ -0.8
PTPN7-201ENST00000309017 SLC25A1P53007 311 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 GPR85P60893 370 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 ZNF684Q5T5D7 378 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 AVPI1Q5T686 147 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 OR52W1Q6IF63 320 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 SLC18B1Q6NT16 456 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 UQCC3Q6UW78 93 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 FAM122BQ7Z309 247 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 TRAPPC6BQ86SZ2 158 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 ANKRD9Q96BM1 317 aaPredicted RBP10.08□□□□□ -0.8
PTPN7-201ENST00000309017 SMIM10Q96HG1 83 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 CST11Q9H112 138 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 CSAG2Q9Y5P2 127 aa10.08□□□□□ -0.8
PTPN7-201ENST00000309017 BDP1A6H8Y1 2624 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 SEC16AO15027 2179 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 TRBV5-7A0A0A0MS05 114 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 TMEM200CA6NKL6 621 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 EIF1AYO14602 144 aaKnown RBP10.07□□□□□ -0.8
PTPN7-201ENST00000309017 STK17BO94768 372 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 CBR1P16152 277 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 EIF1AXP47813 144 aaKnown RBP10.07□□□□□ -0.8
PTPN7-201ENST00000309017 SCAND1P57086 179 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 MESTQ5EB52 335 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 OR1M1Q8NGA1 313 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 TM4SF19Q96DZ7 209 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 PHYHIPLQ96FC7 376 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 C2orf74A8MZ97 194 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 CLDN4O14493 209 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 PHYHO14832 338 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 ABHD16AO95870 558 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 SPP1P10451 314 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 CXCR1P25024 350 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 RAB38P57729 211 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 EGR3Q06889 387 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 INPP5JQ15735 1006 aaPredicted RBP10.07□□□□□ -0.8
PTPN7-201ENST00000309017 PLEKHN1Q494U1 663 aaPredicted RBP10.07□□□□□ -0.8
PTPN7-201ENST00000309017 TMEM225Q6GV28 225 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 ZNF585AQ6P3V2 769 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 KCTD18Q6PI47 426 aaPredicted RBP10.07□□□□□ -0.8
PTPN7-201ENST00000309017 LYG2Q86SG7 212 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 ADGRE4PQ86SQ3 457 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 BCORP1Q8N888 145 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 ELP5Q8TE02 316 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 GAL3ST4Q96RP7 486 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 SELENOIQ9C0D9 397 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 MMP25Q9NPA2 562 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 PRTFDC1Q9NRG1 225 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 CENPMQ9NSP4 180 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 TMED7Q9Y3B3 224 aa10.07□□□□□ -0.8
PTPN7-201ENST00000309017 RAB19A4D1S5 217 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 RNF222A6NCQ9 220 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 OR6C76A6NM76 312 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 MEOX2P50222 304 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 RUNX3Q13761 415 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 ZNF345Q14585 488 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 MEF2DQ14814 521 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 CBLN3Q6UW01 205 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 LINC00114Q6XXX2 140 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 OR51A2Q8NGJ7 313 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 SP7Q8TDD2 431 aaPredicted RBP10.06□□□□□ -0.8
PTPN7-201ENST00000309017 RNF141Q8WVD5 230 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 NUDCD2Q8WVJ2 157 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 EDAQ92838 391 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 CMBLQ96DG6 245 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 VWCEQ96DN2 955 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 KTI12Q96EK9 354 aaPredicted RBP10.06□□□□□ -0.8
PTPN7-201ENST00000309017 TSPAN32Q96QS1 320 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 LMF2Q9BU23 707 aaKnown RBP10.06□□□□□ -0.8
PTPN7-201ENST00000309017 TLNRD1Q9H1K6 362 aa10.06□□□□□ -0.8
PTPN7-201ENST00000309017 HIF3AQ9Y2N7 669 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms