RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 EEF1E1O43324 174 aaKnown RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 LYRM1O43325 122 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 PMS2P2O95744 297 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 MT-CO3P00414 261 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 RAF1P04049 648 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ICAM2P13598 275 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ZNF823P16415 610 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 FKBP2P26885 142 aaKnown RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 MAPK3P27361 379 aaPredicted RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 CDAP32320 146 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 MAP2K3P46734 347 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 AGFG1P52594 562 aaKnown RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 RIDAP52758 137 aaKnown RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 TPTEP56180 551 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 RPS15P62841 145 aaKnown RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 PLA2G7Q13093 441 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ACER2Q5QJU3 275 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 THEM4Q5T1C6 240 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 PYHIN1Q6K0P9 492 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 LRFN4Q6PJG9 635 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 DNM1P34Q6PK57 102 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 FCRLAQ7L513 359 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 RAB43Q86YS6 212 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 IZUMO1Q8IYV9 350 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 DUSP18Q8NEJ0 188 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 NOXO1Q8NFA2 376 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 OR6X1Q8NH79 312 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ZNF671Q8TAW3 534 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 TMEM41AQ96HV5 264 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 SGCZQ96LD1 299 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 EDEM2Q9BV94 578 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 DEPPQ9NTK1 212 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 OR5V1Q9UGF6 321 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 EMC9Q9Y3B6 208 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 MRPS18BQ9Y676 258 aaKnown RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 KMT2EQ8IZD2 1858 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 NCKAP5O14513 1909 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 DOCK10Q96BY6 2186 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 CNTRLQ7Z7A1 2325 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 IGHV3-15A0A0B4J1V0 119 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 MEIOCA2RUB1 952 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 CBR3O75828 277 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ZNF432O94892 652 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 MAS1P04201 325 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 SERPINA7P05543 415 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 RFPL3SP0C7P2 107 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 DDOSTP39656 456 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 SRP9P49458 86 aaKnown RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 SLC35A1P78382 337 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 DGCR2P98153 550 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 CAMK2BQ13554 666 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 CCDC92Q53HC0 331 aaPredicted RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 UBE2NLQ5JXB2 153 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 RAET1LQ5VY80 246 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 CARD17Q5XLA6 110 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ASB18Q6ZVZ8 466 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 PRSS45Q7RTY3 260 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ESX1Q8N693 406 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ZBTB8BQ8NAP8 495 aaPredicted RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 RNF133Q8WVZ7 376 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ASB5Q8WWX0 329 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ADAMTS14Q8WXS8 1223 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ZC3HAV1LQ96H79 300 aaKnown RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 RBP7Q96R05 134 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 UCN2Q96RP3 112 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 PRELID1Q9Y255 219 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 LHFPL6Q9Y693 200 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 R4GMQ9 66 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 LRRC3CA6NJW4 275 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 UBL3O95164 117 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 F10P00742 488 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 IGHG1P01857 330 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ZNF43P17038 809 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 LAP3P28838 519 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 BTCP35070 178 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 MMP15P51511 669 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 CLRN1P58418 232 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 SPEM2Q0P670 501 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 GPR176Q14439 515 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 TMEM53Q6P2H8 277 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 SLC25A47Q6Q0C1 308 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 CFAP77Q6ZQR2 320 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 AKAP14Q86UN6 197 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 SERPINA12Q8IW75 414 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 BEST3Q8N1M1 668 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 SUMF1Q8NBK3 374 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 YIPF5Q969M3 257 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 RFT1Q96AA3 541 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ITPKCQ96DU7 683 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 CMTM3Q96MX0 182 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 ZFP3Q96NJ6 502 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 HDHD2Q9H0R4 259 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 RNF121Q9H920 327 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 EMC7Q9NPA0 242 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 TMEM9BQ9NQ34 198 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 NLKQ9UBE8 527 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 GTF2A1LQ9UNN4 478 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 MRPS7Q9Y2R9 242 aaKnown RBP5.82□□□□□ -1.48
USP47-201ENST00000305481 DMXL1Q9Y485 3027 aa5.82□□□□□ -1.48
USP47-201ENST00000305481 PCNX2A6NKB5 2137 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms