RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 SP1P08047 785 aa19.79■□□□□ 0.76
SMAD1-201ENST00000302085 POU3F2P20265 443 aaPredicted RBP19.79■□□□□ 0.76
SMAD1-201ENST00000302085 EVX1P49640 407 aa19.79■□□□□ 0.76
SMAD1-201ENST00000302085 ODF4Q2M2E3 257 aa19.79■□□□□ 0.76
SMAD1-201ENST00000302085 OR2V1Q8NHB1 315 aa19.79■□□□□ 0.76
SMAD1-201ENST00000302085 TMEM54Q969K7 222 aa19.79■□□□□ 0.76
SMAD1-201ENST00000302085 COMMD4Q9H0A8 199 aa19.79■□□□□ 0.76
SMAD1-201ENST00000302085 C14orf119Q9NWQ9 140 aa19.79■□□□□ 0.76
SMAD1-201ENST00000302085 AK6Q9Y3D8 172 aaKnown RBP19.79■□□□□ 0.76
SMAD1-201ENST00000302085 CXCL13O43927 109 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 TMCC2O75069 709 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 HPNP05981 417 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 CELA3AP09093 270 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 SOX8P57073 446 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 TRIM16LQ309B1 348 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 PHYHD1Q5SRE7 291 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 AGAP7PQ5VUJ5 663 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 CNIH2Q6PI25 160 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 IL17RDQ8NFM7 739 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 AGAP4Q96P64 663 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 GFI1Q99684 422 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 EMC7Q9NPA0 242 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 DLL3Q9NYJ7 618 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 GLTPQ9NZD2 209 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 FBXL3Q9UKT7 428 aa19.78■□□□□ 0.76
SMAD1-201ENST00000302085 CNOT1A5YKK6 2376 aaKnown RBP19.78■□□□□ 0.76
SMAD1-201ENST00000302085 NOTOA8MTQ0 251 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 ZNF254O75437 659 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 ZNF432O94892 652 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 OCM2P0CE71 109 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 OCMP0CE72 109 aaPredicted RBP19.77■□□□□ 0.76
SMAD1-201ENST00000302085 SOX2P48431 317 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 SLC25A25Q6KCM7 469 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 XKRXQ6PP77 449 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 SLC22A16Q86VW1 577 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 CATSPERDQ86XM0 798 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 TMEM123Q8N131 208 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 OR51A4Q8NGJ6 313 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 OR10D3Q8NH80 312 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 RNF133Q8WVZ7 376 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 HTRA1Q92743 480 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 SF3B5Q9BWJ5 86 aaKnown RBP19.77■□□□□ 0.76
SMAD1-201ENST00000302085 TTTY12Q9BZ98 90 aa19.77■□□□□ 0.76
SMAD1-201ENST00000302085 OR5H15A6NDH6 313 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 FAM166BA8MTA8 275 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 GPR171O14626 319 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 PRKAR1AP10644 381 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 EPXP11678 715 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 WT1P19544 449 aaPredicted RBP19.77■□□□□ 0.75
SMAD1-201ENST00000302085 MADCAM1Q13477 382 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 KCNMB1Q16558 191 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 DEGS2Q6QHC5 323 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 ROBO4Q8WZ75 1007 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 SLC25A18Q9H1K4 315 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 TIGARQ9NQ88 270 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 B4GALT7Q9UBV7 327 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 LHFPL6Q9Y693 200 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 KIAA1549Q9HCM3 1950 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 ZNF292O60281 2723 aa19.77■□□□□ 0.75
SMAD1-201ENST00000302085 MUC6Q6W4X9 2439 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 TRBV5-7A0A0A0MS05 114 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 NME2P1O60361 137 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 SLC19A2O60779 497 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 ATF1P18846 271 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 ELK1P19419 428 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 NME2P22392 152 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 AZGP1P25311 298 aaKnown RBP19.76■□□□□ 0.75
SMAD1-201ENST00000302085 CSNK1A1P48729 337 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 RRADP55042 308 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 BAK1Q16611 211 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 GALNTL5Q7Z4T8 443 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 OR8H2Q8N162 312 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 OR10S1Q8NGN2 331 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 OR6N1Q8NGY5 312 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 GPR148Q8TDV2 347 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 CENPMQ9NSP4 180 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 R4GMQ9 66 aa19.76■□□□□ 0.75
SMAD1-201ENST00000302085 ZFHX2Q9C0A1 2572 aaPredicted RBP19.76■□□□□ 0.75
SMAD1-201ENST00000302085 RIF1Q5UIP0 2472 aaKnown RBP19.76■□□□□ 0.75
SMAD1-201ENST00000302085 H3BSH0 61 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 LINC01387J3KSC0 135 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 PAHP00439 452 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 EIF1AXP47813 144 aaKnown RBP19.75■□□□□ 0.75
SMAD1-201ENST00000302085 SELENOPP49908 381 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 PSMD7P51665 324 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 ZNF775Q96BV0 537 aaPredicted RBP19.75■□□□□ 0.75
SMAD1-201ENST00000302085 SLAMF6Q96DU3 332 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 PPP1R3EQ9H7J1 279 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 FAIMQ9NVQ4 179 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 GTF2A1LQ9UNN4 478 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 ANKRD61A6NGH8 418 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 CDK2AP1O14519 115 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 GLSO94925 669 aaPredicted RBP19.75■□□□□ 0.75
SMAD1-201ENST00000302085 MAPK3P27361 379 aaPredicted RBP19.75■□□□□ 0.75
SMAD1-201ENST00000302085 APEX1P27695 318 aaKnown RBP19.75■□□□□ 0.75
SMAD1-201ENST00000302085 MAGEA5P43359 124 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 ZNF133P52736 654 aaPredicted RBP19.75■□□□□ 0.75
SMAD1-201ENST00000302085 TMEM251Q8N6I4 163 aa19.75■□□□□ 0.75
SMAD1-201ENST00000302085 ZNF552Q9H707 407 aaPredicted RBP19.75■□□□□ 0.75
SMAD1-201ENST00000302085 G6PC2Q9NQR9 355 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms