RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 VN1R2Q8NFZ6 395 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 KIR3DX1Q9H7L2 352 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FLVCR2Q9UPI3 526 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CSAG2Q9Y5P2 127 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ATP23Q9Y6H3 246 aa12.42□□□□□ -0.42
CHRFAM7A-201ENST00000299847 AQP7P3A6NL99 342 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PRRT4C9JH25 899 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SSSCA1O60232 199 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CPT2P23786 658 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 HSF1Q00613 529 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SHHQ15465 462 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ACKR1Q16570 336 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 HAGHQ16775 308 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MYEOVQ96EZ4 313 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SCN11AQ9UI33 1791 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 A0A1B0GTW7 788 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CRYM-AS1A6NIL9 109 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 IGHEP01854 428 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 GNB2P62879 340 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 DGCR2P98153 550 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 C6orf15Q6UXA7 325 aaPredicted RBP12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TMEM178AQ8NBL3 297 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR52I2Q8NH67 350 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 YIPF5Q969M3 257 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 NUP98P52948 1817 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SLC19A1P41440 591 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RAD52P43351 418 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 USP51Q70EK9 711 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ZFP62Q8NB50 900 aaPredicted RBP12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 GPR119Q8TDV5 335 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FN3KRPQ9HA64 309 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FGF17O60258 216 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 WNT11O96014 354 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SDHBP21912 280 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CLEC12BQ2HXU8 276 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ACSM5Q6NUN0 579 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 GJC3Q8NFK1 279 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ST8SIA2Q92186 375 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ZNF2Q9BSG1 426 aaPredicted RBP12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CRLF2Q9HC73 371 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MRPS2Q9Y399 296 aaKnown RBP12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 C4AP0C0L4 1744 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LOC107986453A0A1B0GWG9 222 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR5K3A6NET4 321 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TMEM235A6NFC5 223 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LAP3P28838 519 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SOX18P35713 384 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 FLI1Q01543 452 aaPredicted RBP12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SAXO2Q658L1 398 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 KCNRGQ8N5I3 272 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RNF141Q8WVD5 230 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 GON7Q9BXV9 100 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 RNF150Q9ULK6 438 aa12.41□□□□□ -0.42
CHRFAM7A-201ENST00000299847 A0A087WV62 115 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ZNF26P17031 533 aaPredicted RBP12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 THNSL2Q86YJ6 484 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 GCNT2Q8N0V5 402 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR51F2Q8NH61 342 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 TEAD3Q99594 435 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 ATP1B1P05026 303 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PAX6P26367 422 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PSMB3P49720 205 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 GRB2P62993 217 aaKnown RBP12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SYT14P1Q58G82 188 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 P2RY12Q9H244 342 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PRELID3BQ9Y3B1 194 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 NPFFR2Q9Y5X5 522 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 MYH9P35579 1960 aaKnown RBP12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 LINC01565O15544 149 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 EIF1BO60739 113 aaKnown RBP12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 HPNP05981 417 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 METRNLQ641Q3 311 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 CD300LGQ6UXG3 332 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 NANOGP1Q8N7R0 232 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 OR1N1Q8NGS0 311 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PSD2Q9BQI7 771 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 C1QTNF3Q9BXJ4 246 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 BARHL1Q9BZE3 327 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 PLA2G12AQ9BZM1 189 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SLC23A1Q9UHI7 598 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 S100A11P31949 105 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 DLEU7Q6UYE1 221 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 WFDC8Q8IUA0 241 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 EVA1AQ9H8M9 152 aa12.4□□□□□ -0.42
CHRFAM7A-201ENST00000299847 SOX15O60248 233 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CTRB1P17538 263 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CST5P28325 142 aaPredicted RBP12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PYCR3Q53H96 274 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TMEM41BQ5BJD5 291 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SOHLH1Q5JUK2 328 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CTRB2Q6GPI1 263 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TMEM123Q8N131 208 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 MZB1Q8WU39 189 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SLCO4A1Q96BD0 722 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 C14orf79Q96F83 325 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TMEM38AQ9H6F2 299 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ETV7Q9Y603 341 aa12.4□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ZNF77Q15935 545 aa12.39□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TOR2AQ5JU69 321 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms