RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CLDN18P56856 261 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 POU3F1Q03052 451 aaPredicted RBP18.5■□□□□ 0.55
SMCO4-201ENST00000298966 C1DQ13901 141 aaKnown RBP18.5■□□□□ 0.55
SMCO4-201ENST00000298966 GGTLC2Q14390 218 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 MESTQ5EB52 335 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 SYT6Q5T7P8 510 aaPredicted RBP18.5■□□□□ 0.55
SMCO4-201ENST00000298966 DNM1P34Q6PK57 102 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 POMGNT2Q8NAT1 580 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 ASB10Q8WXI3 467 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 RASD2Q96D21 266 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 LGALS12Q96DT0 336 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 NMNAT3Q96T66 252 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 ALG12Q9BV10 488 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 INPP5EQ9NRR6 644 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 CHCHD3Q9NX63 227 aaKnown RBP18.5■□□□□ 0.55
SMCO4-201ENST00000298966 VSX1Q9NZR4 365 aaPredicted RBP18.5■□□□□ 0.55
SMCO4-201ENST00000298966 B3GAT1Q9P2W7 334 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 EXOSC1Q9Y3B2 195 aaKnown RBP18.5■□□□□ 0.55
SMCO4-201ENST00000298966 FKBP7Q9Y680 259 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 CEPT1Q9Y6K0 416 aa18.5■□□□□ 0.55
SMCO4-201ENST00000298966 PRSS37A4D1T9 235 aa18.49■□□□□ 0.55
SMCO4-201ENST00000298966 SLC22A20A6NK97 555 aa18.49■□□□□ 0.55
SMCO4-201ENST00000298966 FAM183AA6NL82 134 aa18.49■□□□□ 0.55
SMCO4-201ENST00000298966 ZNF701M0R085 212 aaPredicted RBP18.49■□□□□ 0.55
SMCO4-201ENST00000298966 TNFSF11O14788 317 aa18.49■□□□□ 0.55
SMCO4-201ENST00000298966 MYL12AP19105 171 aa18.49■□□□□ 0.55
SMCO4-201ENST00000298966 CRABP1P29762 137 aa18.49■□□□□ 0.55
SMCO4-201ENST00000298966 MAP2K4P45985 399 aa18.49■□□□□ 0.55
SMCO4-201ENST00000298966 SIRPAP78324 504 aa18.49■□□□□ 0.55
SMCO4-201ENST00000298966 OR52I1Q8NGK6 324 aa18.49■□□□□ 0.55
SMCO4-201ENST00000298966 OTULINQ96BN8 352 aa18.49■□□□□ 0.55
SMCO4-201ENST00000298966 ZNF845Q96IR2 970 aaPredicted RBP18.49■□□□□ 0.55
SMCO4-201ENST00000298966 TEAD3Q99594 435 aa18.49■□□□□ 0.55
SMCO4-201ENST00000298966 OR6C68A6NDL8 312 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 RNF223E7ERA6 249 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 GLCEO94923 617 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 ATP6V1E1P36543 226 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 CDKN2AP42771 156 aaKnown RBP18.48■□□□□ 0.55
SMCO4-201ENST00000298966 CAPZA2P47755 286 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 GP2P55259 537 aaKnown RBP18.48■□□□□ 0.55
SMCO4-201ENST00000298966 CLDN20P56880 219 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 RPS7P62081 194 aaKnown RBP18.48■□□□□ 0.55
SMCO4-201ENST00000298966 ACTC1P68032 377 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 ACTA1P68133 377 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 KLHL12Q53G59 568 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 BEX5Q5H9J7 111 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 NHLRC1Q6VVB1 395 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 ZNF704Q6ZNC4 412 aaPredicted RBP18.48■□□□□ 0.55
SMCO4-201ENST00000298966 CYB561A3Q8NBI2 242 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 MAPK1IP1LQ8NDC0 245 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 BBS1Q8NFJ9 593 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 OR6X1Q8NH79 312 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 OR10D3Q8NH80 312 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 ZNF420Q8TAQ5 688 aaPredicted RBP18.48■□□□□ 0.55
SMCO4-201ENST00000298966 DNAJA3Q96EY1 480 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 OR51V1Q9H2C8 321 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 ERGIC3Q9Y282 383 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 COMMD3-BMI1R4GMX3 469 aa18.48■□□□□ 0.55
SMCO4-201ENST00000298966 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.47■□□□□ 0.55
SMCO4-201ENST00000298966 CCDC182A6NF36 153 aa18.47■□□□□ 0.55
SMCO4-201ENST00000298966 TRAF3IP2O43734 574 aaPredicted RBP18.47■□□□□ 0.55
SMCO4-201ENST00000298966 INMTO95050 263 aa18.47■□□□□ 0.55
SMCO4-201ENST00000298966 PLGP00747 810 aaPredicted RBP18.47■□□□□ 0.55
SMCO4-201ENST00000298966 OPN1LWP04000 364 aa18.47■□□□□ 0.55
SMCO4-201ENST00000298966 IFNGR1P15260 489 aa18.47■□□□□ 0.55
SMCO4-201ENST00000298966 SPI1P17947 270 aa18.47■□□□□ 0.55
SMCO4-201ENST00000298966 KIR2DL2P43627 348 aaPredicted RBP18.47■□□□□ 0.55
SMCO4-201ENST00000298966 CLEC12BQ2HXU8 276 aa18.47■□□□□ 0.55
SMCO4-201ENST00000298966 ZNF367Q7RTV3 350 aa18.47■□□□□ 0.55
SMCO4-201ENST00000298966 MNTQ99583 582 aa18.47■□□□□ 0.55
SMCO4-201ENST00000298966 CR1P17927 2039 aa18.47■□□□□ 0.55
SMCO4-201ENST00000298966 H3BSA7 217 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 SERPINI2O75830 405 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 SYNGR4O95473 234 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 IGHG1P01857 330 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 IGHA1P01876 353 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 CD8BP10966 210 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 EIF1AXP47813 144 aaKnown RBP18.46■□□□□ 0.55
SMCO4-201ENST00000298966 SUCLG1P53597 346 aaKnown RBP18.46■□□□□ 0.55
SMCO4-201ENST00000298966 SLC16A1P53985 500 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 ABLIM2Q6H8Q1 611 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 GPAT4Q86UL3 456 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 ZBTB46Q86UZ6 589 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 EGFL6Q8IUX8 553 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 ZNF611Q8N823 705 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 PROKR2Q8NFJ6 384 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 KISS1RQ969F8 398 aaPredicted RBP18.46■□□□□ 0.55
SMCO4-201ENST00000298966 MRPL48Q96GC5 212 aaKnown RBP18.46■□□□□ 0.55
SMCO4-201ENST00000298966 SLC25A44Q96H78 314 aaPredicted RBP18.46■□□□□ 0.55
SMCO4-201ENST00000298966 KCNK17Q96T54 332 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 MND1Q9BWT6 205 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 HCAR1Q9BXC0 346 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 MED20Q9H944 212 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 RPRD1BQ9NQG5 326 aaKnown RBP18.46■□□□□ 0.55
SMCO4-201ENST00000298966 YAE1D1Q9NRH1 226 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 KLHL13Q9P2N7 655 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 MCTS1Q9ULC4 181 aaKnown RBP18.46■□□□□ 0.55
SMCO4-201ENST00000298966 RCE1Q9Y256 329 aa18.46■□□□□ 0.55
SMCO4-201ENST00000298966 TMEM129A0AVI4 362 aa18.45■□□□□ 0.54
SMCO4-201ENST00000298966 SLC22A23A1A5C7 686 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms