RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 OVCH1Q7RTY7 1134 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 IL22RA1Q8N6P7 574 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 AKIP1Q9NQ31 210 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 NDRG3Q9UGV2 375 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 SYT5O00445 386 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 ABLIM3O94929 683 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 AIFM1O95831 613 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 TMEM182Q6ZP80 229 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-201ENST00000295550 NKAIN3Q8N8D7 197 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 ZFYVE21Q9BQ24 234 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 BLVRBP30043 206 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-201ENST00000295550 RPS15P62841 145 aaKnown RBP9.08□□□□□ -0.96
COL6A3-201ENST00000295550 FIGLAQ6QHK4 219 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 ESPNLQ6ZVH7 1005 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 KANSL1Q7Z3B3 1105 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF761Q86XN6 746 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-201ENST00000295550 FAM3DQ96BQ1 224 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 TRIM77I1YAP6 450 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 HSD17B6O14756 317 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 OR10A3P58181 314 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 SLC7A6Q92536 515 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 OCEL1Q9H607 264 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 PLAC1Q9HBJ0 212 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 MRPS28Q9Y2Q9 187 aaKnown RBP9.08□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF593O00488 134 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-201ENST00000295550 PRAMEF4O60810 478 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 ABHD17BQ5VST6 288 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 EID2Q8N6I1 236 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 CNEP1R1Q8N9A8 125 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 PDGFBP01127 241 aaPredicted RBP9.08□□□□□ -0.96
COL6A3-201ENST00000295550 KLKB1P03952 638 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 TBPP20226 339 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 LCN6P62502 163 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 DEFB110Q30KQ9 67 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 NPSR1Q6W5P4 371 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 AKR7LQ8NHP1 331 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 ARSGQ96EG1 525 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 GPR174Q9BXC1 333 aa9.08□□□□□ -0.96
COL6A3-201ENST00000295550 H3BQ06 376 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 OR2F2O95006 317 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 HBQ1P09105 142 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 OR2F1Q13607 317 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 LEXMQ3ZCV2 418 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 Q6ZTK2 550 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 SLC25A37Q9NYZ2 338 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 APOBEC3BQ9UH17 382 aaKnown RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 ATP1B1P05026 303 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 SPP1P10451 314 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 TPPP2P59282 170 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 GLYATL3Q5SZD4 288 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 MRPL2Q5T653 305 aaKnown RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 HENMT1Q5T8I9 393 aaKnown RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 RNF113BQ8IZP6 322 aaKnown RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 ABHD6Q9BV23 337 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 PBX4Q9BYU1 374 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 SEMA4CQ9C0C4 833 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 OR52A1Q9UKL2 312 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 PIGLQ9Y2B2 252 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 C1QAP02745 245 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 CLRN3Q8NCR9 226 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 TECTBQ96PL2 329 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 LYSMD1Q96S90 227 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 LYRM2Q9NU23 88 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 RNF186Q9NXI6 227 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 YTHDF2Q9Y5A9 579 aaKnown RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 CSN1S1P47710 185 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 DUSP3P51452 185 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 IQCJQ1A5X6 159 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 TOMM20LQ6UXN7 152 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 WDR5BQ86VZ2 330 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 SLC22A24Q8N4F4 322 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 OR51S1Q8NGJ8 323 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 TSLPQ969D9 159 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 TVP23CQ96ET8 276 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 NMES1Q9C002 83 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 PRELID3BQ9Y3B1 194 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 ENTPD2Q9Y5L3 495 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 BMPR1AP36894 532 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 POLR2IP36954 125 aaKnown RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 SRP9P49458 86 aaKnown RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 RACK1P63244 317 aaKnown RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 SYPL1Q16563 259 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 Q499Y3 187 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 VRK3Q8IV63 474 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 DCLRE1CQ96SD1 692 aaKnown RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 LINC00597Q9H2U6 94 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 C12orf10Q9HB07 376 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 RAB22AQ9UL26 194 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 CEBPBP17676 345 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 RPL7P18124 248 aaKnown RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 DUSP1P28562 367 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 MPGP29372 298 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 SLC6A12P48065 614 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 MBOAT2Q6ZWT7 520 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 ABHD4Q8TB40 342 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 ADOQ96SZ5 270 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 BARX1Q9HBU1 254 aaPredicted RBP9.07□□□□□ -0.96
COL6A3-201ENST00000295550 HCFC1R1Q9NWW0 138 aa9.07□□□□□ -0.96
COL6A3-201ENST00000295550 PHF3Q92576 2039 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms