RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 OR2H1Q9GZK4 316 aa23.31■■□□□ 1.32
SSU72-201ENST00000291386 PLEKHA6Q9Y2H5 1048 aa23.31■■□□□ 1.32
SSU72-201ENST00000291386 ATP23Q9Y6H3 246 aa23.31■■□□□ 1.32
SSU72-201ENST00000291386 LRBAP50851 2863 aa23.3■■□□□ 1.32
SSU72-201ENST00000291386 IQCMA0A1B0GVH7 501 aa23.3■■□□□ 1.32
SSU72-201ENST00000291386 SURF4O15260 269 aa23.3■■□□□ 1.32
SSU72-201ENST00000291386 MPZL1O95297 269 aa23.3■■□□□ 1.32
SSU72-201ENST00000291386 IGFBP5P24593 272 aa23.3■■□□□ 1.32
SSU72-201ENST00000291386 AQP6Q13520 282 aa23.3■■□□□ 1.32
SSU72-201ENST00000291386 KEAP1Q14145 624 aa23.3■■□□□ 1.32
SSU72-201ENST00000291386 PTGES3Q15185 160 aaKnown RBP23.3■■□□□ 1.32
SSU72-201ENST00000291386 ZNF544Q6NX49 715 aa23.3■■□□□ 1.32
SSU72-201ENST00000291386 CPEB3Q8NE35 698 aaKnown RBP23.3■■□□□ 1.32
SSU72-201ENST00000291386 USE1Q9NZ43 259 aa23.3■■□□□ 1.32
SSU72-201ENST00000291386 NAV2Q8IVL1 2488 aa23.3■■□□□ 1.32
SSU72-201ENST00000291386 HGFACQ04756 655 aa23.29■■□□□ 1.32
SSU72-201ENST00000291386 SCRN3Q0VDG4 424 aa23.29■■□□□ 1.32
SSU72-201ENST00000291386 ALDH16A1Q8IZ83 802 aa23.29■■□□□ 1.32
SSU72-201ENST00000291386 SLC30A7Q8NEW0 376 aa23.29■■□□□ 1.32
SSU72-201ENST00000291386 OR1J2Q8NGS2 313 aa23.29■■□□□ 1.32
SSU72-201ENST00000291386 SMAP2Q8WU79 429 aaPredicted RBP23.29■■□□□ 1.32
SSU72-201ENST00000291386 PIGTQ969N2 578 aa23.29■■□□□ 1.32
SSU72-201ENST00000291386 CIB1Q99828 191 aa23.29■■□□□ 1.32
SSU72-201ENST00000291386 GRIP2Q9C0E4 1043 aa23.29■■□□□ 1.32
SSU72-201ENST00000291386 WNT5BQ9H1J7 359 aa23.29■■□□□ 1.32
SSU72-201ENST00000291386 FAIMQ9NVQ4 179 aa23.29■■□□□ 1.32
SSU72-201ENST00000291386 ANKRD65E5RJM6 399 aa23.28■■□□□ 1.32
SSU72-201ENST00000291386 SNAP29O95721 258 aa23.28■■□□□ 1.32
SSU72-201ENST00000291386 GPANK1O95872 356 aa23.28■■□□□ 1.32
SSU72-201ENST00000291386 TFP02787 698 aa23.28■■□□□ 1.32
SSU72-201ENST00000291386 SPI1P17947 270 aa23.28■■□□□ 1.32
SSU72-201ENST00000291386 CENPAP49450 140 aa23.28■■□□□ 1.32
SSU72-201ENST00000291386 NKX6-1P78426 367 aaPredicted RBP23.28■■□□□ 1.32
SSU72-201ENST00000291386 TMEM236Q5W0B7 351 aa23.28■■□□□ 1.32
SSU72-201ENST00000291386 PROKR2Q8NFJ6 384 aa23.28■■□□□ 1.32
SSU72-201ENST00000291386 GABARAPL3Q9BY60 117 aa23.28■■□□□ 1.32
SSU72-201ENST00000291386 ZAR1LA6NP61 321 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 FAM171A2A8MVW0 826 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 ALPLP05186 524 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 COX5BP10606 129 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 NR4A1P22736 598 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 TTKP33981 857 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 BLVRAP53004 296 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 TEKQ02763 1124 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 DBPQ10586 325 aaPredicted RBP23.27■■□□□ 1.32
SSU72-201ENST00000291386 DAG1Q14118 895 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 DTX2Q86UW9 622 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 OR9Q1Q8NGQ5 310 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 ZNRF4Q8WWF5 429 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 PTP4A1Q93096 173 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 CCL19Q99731 98 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 MRPL22Q9NWU5 206 aaKnown RBP23.27■■□□□ 1.32
SSU72-201ENST00000291386 ASH2LQ9UBL3 628 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 KCNG2Q9UJ96 466 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 CSMD2Q7Z408 3487 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 CSMD1Q96PZ7 3565 aa23.27■■□□□ 1.32
SSU72-201ENST00000291386 PAICSP22234 425 aaKnown RBP23.26■■□□□ 1.31
SSU72-201ENST00000291386 STOMP27105 288 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 APOBEC3AP31941 199 aaPredicted RBP23.26■■□□□ 1.31
SSU72-201ENST00000291386 PYCR1P32322 319 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 ALDH3A2P51648 485 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 HIST1H3AP68431 136 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 TBC1D28Q2M2D7 210 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 HIST2H3PS2Q5TEC6 136 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 SLX4IPQ5VYV7 408 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 HIST2H3AQ71DI3 136 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 AKR7LQ8NHP1 331 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 POM121L2Q96KW2 1035 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 C9orf16Q9BUW7 83 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 PRRG3Q9BZD7 231 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 ZNF442Q9H7R0 627 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 CA10Q9NS85 328 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 BEX4Q9NWD9 120 aaPredicted RBP23.26■■□□□ 1.31
SSU72-201ENST00000291386 SPEF1Q9Y4P9 236 aa23.26■■□□□ 1.31
SSU72-201ENST00000291386 EI24O14681 340 aa23.25■■□□□ 1.31
SSU72-201ENST00000291386 SOD3P08294 240 aa23.25■■□□□ 1.31
SSU72-201ENST00000291386 APEX1P27695 318 aaKnown RBP23.25■■□□□ 1.31
SSU72-201ENST00000291386 APLNRP35414 380 aa23.25■■□□□ 1.31
SSU72-201ENST00000291386 MEP1BQ16820 701 aa23.25■■□□□ 1.31
SSU72-201ENST00000291386 LINC01590Q5TEZ4 76 aa23.25■■□□□ 1.31
SSU72-201ENST00000291386 ZNF774Q6NX45 483 aa23.25■■□□□ 1.31
SSU72-201ENST00000291386 OR10H5Q8NGA6 315 aa23.25■■□□□ 1.31
SSU72-201ENST00000291386 HCAR1Q9BXC0 346 aa23.25■■□□□ 1.31
SSU72-201ENST00000291386 CDH20Q9HBT6 801 aa23.25■■□□□ 1.31
SSU72-201ENST00000291386 LAMP3Q9UQV4 416 aa23.25■■□□□ 1.31
SSU72-201ENST00000291386 LHFPL6Q9Y693 200 aa23.25■■□□□ 1.31
SSU72-201ENST00000291386 TEX15Q9BXT5 2789 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 ERICH4A6NGS2 130 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 FAM183AA6NL82 134 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 PRR23D1E9PI22 279 aaPredicted RBP23.24■■□□□ 1.31
SSU72-201ENST00000291386 SGCEO43556 437 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 HLA-DQA2P01906 255 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 PRR23D2P0DMB1 279 aaPredicted RBP23.24■■□□□ 1.31
SSU72-201ENST00000291386 CLUP10909 449 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 EPHA2P29317 976 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 FMO3P31513 532 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 GGT2P36268 569 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 FABP6P51161 128 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 AGAP6Q5VW22 663 aa23.24■■□□□ 1.31
SSU72-201ENST00000291386 OTPQ5XKR4 325 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms