RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 RCE1Q9Y256 329 aa17.02■□□□□ 0.32
SHF-201ENST00000290894 URB1O60287 2271 aaKnown RBP17.02■□□□□ 0.32
SHF-201ENST00000290894 TP53I11O14683 189 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 PTGS2P35354 604 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 TMEM255AQ5JRV8 349 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 UEVLDQ8IX04 471 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 TMEM156Q8N614 296 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 C11orf40Q8WZ69 217 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 CACNG6Q9BXT2 260 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 PTGES2Q9H7Z7 377 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 EMC7Q9NPA0 242 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 MYEF2Q9P2K5 600 aaKnown RBP17.02■□□□□ 0.31
SHF-201ENST00000290894 KLHL13Q9P2N7 655 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 FOXJ3Q9UPW0 622 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 DHDHQ9UQ10 334 aa17.02■□□□□ 0.31
SHF-201ENST00000290894 IGLV3-32A0A0A0MS00 114 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 NSG1A0A0A6YYJ2 146 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 A0A0A6YYJ9 748 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 IGHV3-15A0A0B4J1V0 119 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 ETV2O00321 342 aaPredicted RBP17.01■□□□□ 0.31
SHF-201ENST00000290894 HLA-DMAP28067 261 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 OTX2P32243 289 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 PTH2RP49190 550 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 ART1P52961 327 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 SNTB2Q13425 540 aaKnown RBP17.01■□□□□ 0.31
SHF-201ENST00000290894 CATSPERDQ86XM0 798 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 BEST4Q8NFU0 473 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 OR51A2Q8NGJ7 313 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 OR6S1Q8NH40 331 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 ASB5Q8WWX0 329 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 TMEM269A0A1B0GVZ9 245 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 KHDRBS3O75525 346 aaKnown RBP17.01■□□□□ 0.31
SHF-201ENST00000290894 ZNF432O94892 652 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 TCRBP04435 133 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 MPLP40238 635 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 TRA2AQ13595 282 aaKnown RBP eCLIP17.01■□□□□ 0.31
SHF-201ENST00000290894 SLC25A53Q5H9E4 307 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 DNM1P34Q6PK57 102 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 ZNF700Q9H0M5 742 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 PAQR5Q9NXK6 330 aaPredicted RBP17.01■□□□□ 0.31
SHF-201ENST00000290894 TAS2R4Q9NYW5 299 aa17.01■□□□□ 0.31
SHF-201ENST00000290894 PRRC2CQ9Y520 2896 aaKnown RBP17■□□□□ 0.31
SHF-201ENST00000290894 CENPBD1B2RD01 187 aa17■□□□□ 0.31
SHF-201ENST00000290894 GMDSO60547 372 aa17■□□□□ 0.31
SHF-201ENST00000290894 STK17BO94768 372 aa17■□□□□ 0.31
SHF-201ENST00000290894 F10P00742 488 aa17■□□□□ 0.31
SHF-201ENST00000290894 RAF1P04049 648 aa17■□□□□ 0.31
SHF-201ENST00000290894 FOLR3P41439 243 aa17■□□□□ 0.31
SHF-201ENST00000290894 P2RY4P51582 365 aa17■□□□□ 0.31
SHF-201ENST00000290894 CLRN1P58418 232 aa17■□□□□ 0.31
SHF-201ENST00000290894 KLF9Q13886 244 aaPredicted RBP17■□□□□ 0.31
SHF-201ENST00000290894 FDX2Q6P4F2 183 aa17■□□□□ 0.31
SHF-201ENST00000290894 DTWD2Q8NBA8 298 aa17■□□□□ 0.31
SHF-201ENST00000290894 DPAGT1Q9H3H5 408 aa17■□□□□ 0.31
SHF-201ENST00000290894 FAM47E-STBD1D6RA91 191 aa17■□□□□ 0.31
SHF-201ENST00000290894 LOC400499M0QZD8 3231 aa17■□□□□ 0.31
SHF-201ENST00000290894 SULT2B1O00204 365 aa17■□□□□ 0.31
SHF-201ENST00000290894 TRAPPC2P0DI81 140 aa17■□□□□ 0.31
SHF-201ENST00000290894 TRAPPC2BP0DI82 140 aa17■□□□□ 0.31
SHF-201ENST00000290894 CCR9P51686 369 aa17■□□□□ 0.31
SHF-201ENST00000290894 DLX5P56178 289 aa17■□□□□ 0.31
SHF-201ENST00000290894 NCOA6Q14686 2063 aaPredicted RBP17■□□□□ 0.31
SHF-201ENST00000290894 TOMM20Q15388 145 aa17■□□□□ 0.31
SHF-201ENST00000290894 RAET1LQ5VY80 246 aa17■□□□□ 0.31
SHF-201ENST00000290894 ZNF227Q86WZ6 799 aa17■□□□□ 0.31
SHF-201ENST00000290894 PLCZ1Q86YW0 608 aa17■□□□□ 0.31
SHF-201ENST00000290894 HIST2H2ABQ8IUE6 130 aaPredicted RBP17■□□□□ 0.31
SHF-201ENST00000290894 FADS6Q8N9I5 356 aa17■□□□□ 0.31
SHF-201ENST00000290894 MIB2Q96AX9 1013 aa17■□□□□ 0.31
SHF-201ENST00000290894 RBP7Q96R05 134 aa17■□□□□ 0.31
SHF-201ENST00000290894 CGGBP1Q9UFW8 167 aaPredicted RBP17■□□□□ 0.31
SHF-201ENST00000290894 DCDC2BA2VCK2 349 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 P2RY10O00398 339 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 CALCBP10092 127 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 B3GNTL1Q67FW5 361 aaPredicted RBP16.99■□□□□ 0.31
SHF-201ENST00000290894 RPS19BP1Q86WX3 136 aaKnown RBP16.99■□□□□ 0.31
SHF-201ENST00000290894 ZNF454Q8N9F8 522 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 OR10H5Q8NGA6 315 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 DACT3Q96B18 629 aaPredicted RBP16.99■□□□□ 0.31
SHF-201ENST00000290894 HAVCR1Q96D42 359 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 PROK2Q9HC23 129 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 STEAP1Q9UHE8 339 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 R4GMQ9 66 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 CACNA1HO95180 2353 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 LOC107986453A0A1B0GWG9 222 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 TRAF3IP2O43734 574 aaPredicted RBP16.99■□□□□ 0.31
SHF-201ENST00000290894 KDM4BO94953 1096 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 H2BFMP0C1H6 154 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 POU3F4P49335 361 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 SSR4P51571 173 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 RRAS2P62070 204 aaPredicted RBP16.99■□□□□ 0.31
SHF-201ENST00000290894 SPOCK1Q08629 439 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 NHLRC1Q6VVB1 395 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 BIVMQ86UB2 503 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 OR13C3Q8NGS6 347 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 SLC25A44Q96H78 314 aaPredicted RBP16.99■□□□□ 0.31
SHF-201ENST00000290894 MRPL13Q9BYD1 178 aaKnown RBP16.99■□□□□ 0.31
SHF-201ENST00000290894 G6PC2Q9NQR9 355 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 OR52A1Q9UKL2 312 aa16.99■□□□□ 0.31
SHF-201ENST00000290894 FLVCR2Q9UPI3 526 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms