RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 LHX9Q9NQ69 397 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 SLC22A11Q9NSA0 550 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 PIGLQ9Y2B2 252 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 SLCO1B1Q9Y6L6 691 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 A0A1W2PR80 420 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 PRAMEF25A6NGN4 478 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 TMEM212A6NML5 194 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 H3BMH7 237 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 EFSO43281 561 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 LDOC1O95751 146 aaPredicted RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 THBS1P07996 1170 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 LIMS3P0CW19 117 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 LIMS4P0CW20 117 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 RAB6AP20340 208 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 DUSP3P51452 185 aaPredicted RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 GPLD1P80108 840 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 BCL2A1Q16548 175 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 OR52W1Q6IF63 320 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 LINC00299Q6ZSB3 139 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 MRPL21Q7Z2W9 205 aaKnown RBP4.34□□□□□ -1.71
UBR1-201ENST00000290650 OR52N1Q8NH53 320 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 PLCXD1Q9NUJ7 323 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 OBP2AQ9NY56 170 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 CHRNA9Q9UGM1 479 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 FBXO4Q9UKT5 387 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 SIGLEC7Q9Y286 467 aa4.34□□□□□ -1.71
UBR1-201ENST00000290650 LOC107986453A0A1B0GWG9 222 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 TMEM82A0PJX8 343 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 H7C417 338 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 LGALS8O00214 317 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 HMGB3O15347 200 aaKnown RBP4.34□□□□□ -1.72
UBR1-201ENST00000290650 NSA2O95478 260 aaKnown RBP4.34□□□□□ -1.72
UBR1-201ENST00000290650 GAAP10253 952 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 SDHAP31040 664 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 OPRM1P35372 400 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 ZNF93P35789 620 aaPredicted RBP4.34□□□□□ -1.72
UBR1-201ENST00000290650 CX3CR1P49238 355 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 SSR4P51571 173 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 RPL27P61353 136 aaKnown RBP4.34□□□□□ -1.72
UBR1-201ENST00000290650 GARNL3Q5VVW2 1013 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 C12orf73Q69YU5 71 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 HAGHLQ6PII5 290 aaPredicted RBP4.34□□□□□ -1.72
UBR1-201ENST00000290650 SLC16A14Q7RTX9 510 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 CAMKMTQ7Z624 323 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 PXKQ7Z7A4 578 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 LIX1LQ8IVB5 337 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 FAM71CQ8NEG0 241 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 OR4K15Q8NH41 348 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 STOML3Q8TAV4 291 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 HAVCR2Q8TDQ0 301 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 KIAA1143Q96AT1 154 aaPredicted RBP4.34□□□□□ -1.72
UBR1-201ENST00000290650 SRRQ9GZT4 340 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 ARRDC1-AS1Q9H2J1 176 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 CHRDQ9H2X0 955 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 MED17Q9NVC6 651 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 PRR13Q9NZ81 148 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 MRPS28Q9Y2Q9 187 aaKnown RBP4.34□□□□□ -1.72
UBR1-201ENST00000290650 A3GALT2U3KPV4 340 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 HS3ST1O14792 307 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 TNFRSF10CO14798 259 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 PHYHO14832 338 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 ZNF205O95201 554 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 CBX7O95931 251 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 IGHA2P01877 340 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 SRFP11831 508 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 EVX1P49640 407 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 CDK5Q00535 292 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 ZNF117Q03924 483 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 FOXF1Q12946 379 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 CDK10Q15131 360 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 ELAVL1Q15717 326 aaKnown RBP4.34□□□□□ -1.72
UBR1-201ENST00000290650 ALKBH6Q3KRA9 238 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 KRBOX4Q5JUW0 171 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 GPR139Q6DWJ6 353 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 STEAP1BQ6NZ63 245 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 SLC16A9Q7RTY1 509 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 CPEB2Q7Z5Q1 589 aaKnown RBP4.34□□□□□ -1.72
UBR1-201ENST00000290650 C20orf196Q8IYI0 205 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 CLEC1AQ8NC01 280 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 OR51A4Q8NGJ6 313 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 THOC3Q96J01 351 aaKnown RBP4.34□□□□□ -1.72
UBR1-201ENST00000290650 SORCS2Q96PQ0 1159 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 DUSP23Q9BVJ7 150 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 VN1R1Q9GZP7 353 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 ZNF230Q9UIE0 474 aaPredicted RBP4.34□□□□□ -1.72
UBR1-201ENST00000290650 SRPK3Q9UPE1 567 aa4.34□□□□□ -1.72
UBR1-201ENST00000290650 A6NIZ1 184 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 A8MVM7 634 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 FADS1O60427 444 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ICMTO60725 284 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 CRYZL1O95825 349 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 CCL2P13500 99 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 PSMB1P20618 241 aaKnown RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 BDKRB2P30411 391 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 P2RX1P51575 399 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 CARD18P57730 90 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 RAP1BP61224 184 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 RAP1AP62834 184 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 GK2Q14410 553 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 C2orf76Q3KRA6 126 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms