RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 MSR1P21757 451 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 PTAFRP25105 342 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 CLRN1P58418 232 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 ACSM1Q08AH1 577 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 CLINT1Q14677 625 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 SGCAQ16586 387 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 LPCAT3Q6P1A2 487 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 COX15Q7KZN9 410 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 CCDC71LQ8N9Z2 235 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 TMEM38AQ9H6F2 299 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 PILRBQ9UKJ0 227 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 A0A1B0GTL3 188 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 DCTN6O00399 190 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 OMGP23515 440 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 SOX18P35713 384 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 RAP1AP62834 184 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 IFITM2Q01629 132 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 FAM53BQ14153 422 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 Q499Y3 187 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 ABHD17CQ6PCB6 329 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 OLIG3Q7RTU3 272 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 CDS1Q92903 461 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 UPRTQ96BW1 309 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 COX14Q96I36 57 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 WDFY2Q96P53 400 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 SIDT1Q9NXL6 827 aaKnown RBP10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 ASB1Q9Y576 335 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 A0A0B4J203 849 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 SPAARA0A1B0GVQ0 90 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 TAPBPO15533 448 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 OR2T1O43869 369 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 PNLIPP16233 465 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 SRMP19623 302 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 SSTP61278 116 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 ELAVL1Q15717 326 aaKnown RBP10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 GPR139Q6DWJ6 353 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC23A3Q6PIS1 610 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 ZNF619Q8N2I2 560 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 OR4K15Q8NH41 348 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 VPS25Q9BRG1 176 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 UBQLN3Q9H347 655 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC22A11Q9NSA0 550 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 EHFQ9NZC4 300 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 KCNS2Q9ULS6 477 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 GAB2Q9UQC2 676 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 FBXO7Q9Y3I1 522 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 TRIP11Q15643 1979 aa10.39□□□□□ -0.75
NPC1L1-201ENST00000289547 TMEM235A6NFC5 223 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 MYF5P13349 255 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 MAKP20794 623 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 OR4C15Q8NGM1 316 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 OR7D2Q96RA2 312 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 MARVELD1Q9BSK0 173 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 AUNIPQ9H7T9 357 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 TAF9BQ9HBM6 251 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 FSCN3Q9NQT6 498 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 CEP290O15078 2479 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 UMAD1C9J7I0 102 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 HRO43593 1189 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 CTRB1P17538 263 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 EPHA1P21709 976 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 FABP9Q0Z7S8 132 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 OR1Q1Q15612 314 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC22A6Q4U2R8 563 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 TMEM201Q5SNT2 666 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 CTRB2Q6GPI1 263 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 ABHD12BQ7Z5M8 362 aaPredicted RBP10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 LRRTM1Q86UE6 522 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 RPS19BP1Q86WX3 136 aaKnown RBP10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 BAP18Q8IXM2 172 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 OLIG1Q8TAK6 271 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 FAM71F1Q96KD3 344 aaPredicted RBP10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 NICN1Q9BSH3 213 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 MS4A7Q9GZW8 240 aaPredicted RBP10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 ASIC5Q9NY37 505 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 IDSB3KWA1 339 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 GALR3O60755 368 aaPredicted RBP10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 SERPINA7P05543 415 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 IGHV4-34P06331 123 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 FURINP09958 794 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 FASLGP48023 281 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 CCSMST1Q4G0I0 132 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 PRICKLE2Q7Z3G6 844 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 PRR22Q8IZ63 422 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 BPIFCQ8NFQ6 507 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 STT3BQ8TCJ2 826 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 NANOS1Q8WY41 292 aaKnown RBP10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 ATF6BQ99941 703 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 WDR77Q9BQA1 342 aaPredicted RBP10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 NUDT22Q9BRQ3 303 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 CRLF2Q9HC73 371 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 C2orf42Q9NWW7 574 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 ETV7Q9Y603 341 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 SNRPGP15A8MWD9 76 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 HSBP1L1C9JCN9 74 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 ZNF587BE7ETH6 402 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 LGI1O95970 557 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 INHBBP09529 407 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 CX3CR1P49238 355 aa10.38□□□□□ -0.75
NPC1L1-201ENST00000289547 MRPS34P82930 218 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms