RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 LINC00346Q8IVM7 164 aa9.07□□□□□ -0.96
HMGCR-201ENST00000287936 ACBD4Q8NC06 268 aa9.07□□□□□ -0.96
HMGCR-201ENST00000287936 SMRP1Q8NCR6 262 aa9.07□□□□□ -0.96
HMGCR-201ENST00000287936 OR1L3Q8NH93 324 aa9.07□□□□□ -0.96
HMGCR-201ENST00000287936 NAA11Q9BSU3 229 aaPredicted RBP9.07□□□□□ -0.96
HMGCR-201ENST00000287936 MYEF2Q9P2K5 600 aaKnown RBP9.07□□□□□ -0.96
HMGCR-201ENST00000287936 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.07□□□□□ -0.96
HMGCR-201ENST00000287936 PTGS2P35354 604 aa9.07□□□□□ -0.96
HMGCR-201ENST00000287936 BIDP55957 195 aa9.07□□□□□ -0.96
HMGCR-201ENST00000287936 SMAD4Q13485 552 aaKnown RBP9.07□□□□□ -0.96
HMGCR-201ENST00000287936 OR2AK2Q8NG84 335 aa9.07□□□□□ -0.96
HMGCR-201ENST00000287936 MFSD8Q8NHS3 518 aa9.07□□□□□ -0.96
HMGCR-201ENST00000287936 JSRP1Q96MG2 331 aaPredicted RBP9.07□□□□□ -0.96
HMGCR-201ENST00000287936 OR5B2Q96R09 309 aa9.07□□□□□ -0.96
HMGCR-201ENST00000287936 CGGBP1Q9UFW8 167 aaPredicted RBP9.07□□□□□ -0.96
HMGCR-201ENST00000287936 KIAA1549LQ6ZVL6 1849 aa9.07□□□□□ -0.96
HMGCR-201ENST00000287936 IGHV1OR21-1A0A087WYE8 117 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 PIN1P1O15428 100 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 ICMTO60725 284 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 CTAG2O75638 210 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 PIAS2O75928 621 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 KDM4BO94953 1096 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 RNF4P78317 190 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 DCDP81605 110 aaKnown RBP9.06□□□□□ -0.96
HMGCR-201ENST00000287936 SORDQ00796 357 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 SGCAQ16586 387 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 CHRDL2Q6WN34 429 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 TRAPPC6BQ86SZ2 158 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 TMEM229BQ8NBD8 167 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 STT3BQ8TCJ2 826 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 SCARB1Q8WTV0 552 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 HSD17B8Q92506 261 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 DVL3Q92997 716 aaPredicted RBP9.06□□□□□ -0.96
HMGCR-201ENST00000287936 DKKL1Q9UK85 242 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 LRP12Q9Y561 859 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 GON4LQ3T8J9 2241 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 A0A1B0GTH9 108 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 TCRBV16S1A1N1A0A5B0 115 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 PYCARD-AS1I3L0S3 204 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 TSPAN4O14817 238 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 SMAD9O15198 467 aaKnown RBP9.06□□□□□ -0.96
HMGCR-201ENST00000287936 SCRG1O75711 98 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 IGLV3-19P01714 112 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 CTSBP07858 339 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 ZMYND11Q15326 602 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 Q6ZTK2 550 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 TMUB2Q71RG4 321 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 TMEM156Q8N614 296 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 ZNF321PQ8N8H1 164 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 SLC25A38Q96DW6 304 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 SLC6A7Q99884 636 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 VN1R1Q9GZP7 353 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 CHRNA10Q9GZZ6 450 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 ADAM19Q9H013 955 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 RAB33BQ9H082 229 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 CST11Q9H112 138 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 ZCCHC4Q9H5U6 513 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 ATXN7L1Q9ULK2 861 aaPredicted RBP9.06□□□□□ -0.96
HMGCR-201ENST00000287936 B3GALT5Q9Y2C3 310 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 KLHDC2Q9Y2U9 406 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 C13orf42A0A1B0GVH6 325 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 SLC22A23A1A5C7 686 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 TMEM200CA6NKL6 621 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 NPIPA2E9PIF3 369 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 NPIPA3F8WFD2 350 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 UPK3AO75631 287 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 PGAM2P15259 253 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 ZNF84P51523 738 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 NXPH1P58417 271 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 CYCSP99999 105 aaKnown RBP9.06□□□□□ -0.96
HMGCR-201ENST00000287936 PLEKHN1Q494U1 663 aaPredicted RBP9.06□□□□□ -0.96
HMGCR-201ENST00000287936 LRRC37A5PQ49AS3 106 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 DEGS2Q6QHC5 323 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 SLC51BQ86UW2 128 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 ZNF721Q8TF20 911 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 RBPMSQ93062 196 aaKnown RBP9.06□□□□□ -0.96
HMGCR-201ENST00000287936 MOB1AQ9H8S9 216 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 KIF25Q9UIL4 384 aa9.06□□□□□ -0.96
HMGCR-201ENST00000287936 ELF5Q9UKW6 265 aaPredicted RBP9.06□□□□□ -0.96
HMGCR-201ENST00000287936 TGFBR3LH3BV60 316 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 HLA-AP01891 365 aaKnown RBP9.05□□□□□ -0.96
HMGCR-201ENST00000287936 FAM157BP0CG42 384 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 SNRPNP63162 240 aaKnown RBP9.05□□□□□ -0.96
HMGCR-201ENST00000287936 PMPCAQ10713 525 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 ATXN7L3Q14CW9 347 aaPredicted RBP9.05□□□□□ -0.96
HMGCR-201ENST00000287936 NKAIN1Q4KMZ8 207 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 ACTBL2Q562R1 376 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 FGGYQ96C11 551 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 CCDC86Q9H6F5 360 aaKnown RBP9.05□□□□□ -0.96
HMGCR-201ENST00000287936 RPH3AQ9Y2J0 694 aaPredicted RBP9.05□□□□□ -0.96
HMGCR-201ENST00000287936 MDC1Q14676 2089 aaKnown RBP9.05□□□□□ -0.96
HMGCR-201ENST00000287936 hCG_1807616A0A1W2PRN6 198 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 FITM1A5D6W6 292 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 F5H0A9 414 aaPredicted RBP9.05□□□□□ -0.96
HMGCR-201ENST00000287936 PLPP3O14495 311 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 ADAM11O75078 769 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 MPIG6BO95866 241 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 HPXP02790 462 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 CD3DP04234 171 aa9.05□□□□□ -0.96
HMGCR-201ENST00000287936 ANKRD34CP0C6C1 535 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms