RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 RAD52P43351 418 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 FOXF1Q12946 379 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 C1orf87Q8N0U7 546 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 BEST4Q8NFU0 473 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 OR1L3Q8NH93 324 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 UBE2FQ969M7 185 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 OSGIN1Q9UJX0 560 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 LOC107986453A0A1B0GWG9 222 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 PRPH2P23942 346 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 RRAS2P62070 204 aaPredicted RBP16.87■□□□□ 0.29
PCDH1-201ENST00000287008 ACSM5Q6NUN0 579 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 CORO6Q6QEF8 472 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 STK35Q8TDR2 534 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.87■□□□□ 0.29
PCDH1-201ENST00000287008 BORCS7Q96B45 105 aa16.87■□□□□ 0.29
PCDH1-201ENST00000287008 LOC100289279A0A1B0GTE1 492 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 SLC22A23A1A5C7 686 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 SRPXP78539 464 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 OR2A2Q6IF42 318 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 ZNF683Q8IZ20 524 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 OR52H1Q8NGJ2 320 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 OR51A2Q8NGJ7 313 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 TMEM129A0AVI4 362 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 TRIM64CA6NLI5 447 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 CTSVO60911 334 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 EMP3P54852 163 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 DSCR4P56555 118 aaPredicted RBP16.86■□□□□ 0.29
PCDH1-201ENST00000287008 SRSF5Q13243 272 aaKnown RBP16.86■□□□□ 0.29
PCDH1-201ENST00000287008 GALEQ14376 348 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 ZNF718Q3SXZ3 478 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 SFRP5Q5T4F7 317 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 C6orf183Q5T699 404 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 ARL11Q969Q4 196 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 NAA50Q9GZZ1 169 aaKnown RBP16.86■□□□□ 0.29
PCDH1-201ENST00000287008 CLEC2DQ9UHP7 191 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 KIR2DS1A0A191URI9 304 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 ZNF728P0DKX0 622 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 SRMP19623 302 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 KIR2DS4P43632 304 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 RAB4BP61018 213 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 KIR2DS1Q14954 304 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 ZMAT3Q9HA38 289 aaKnown RBP16.86■□□□□ 0.29
PCDH1-201ENST00000287008 LUZP4Q9P127 313 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 COLQQ9Y215 455 aaPredicted RBP16.86■□□□□ 0.29
PCDH1-201ENST00000287008 TRPM6Q9BX84 2022 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 ACSM1Q08AH1 577 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 KIRREL2Q6UWL6 708 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 DNAJC5GQ8N7S2 189 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 DEFB108BQ8NET1 73 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 OR4D9Q8NGE8 314 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 CPNE4Q96A23 557 aaPredicted RBP16.86■□□□□ 0.29
PCDH1-201ENST00000287008 SMIM3Q9BZL3 60 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 IKZF5Q9H5V7 419 aa16.86■□□□□ 0.29
PCDH1-201ENST00000287008 C5orf49A4QMS7 147 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 HES3Q5TGS1 186 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 KISS1RQ969F8 398 aaPredicted RBP16.85■□□□□ 0.29
PCDH1-201ENST00000287008 ATF6BQ99941 703 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 NMNAT2Q9BZQ4 307 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 PLA2G3Q9NZ20 509 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 CGGBP1Q9UFW8 167 aaPredicted RBP16.85■□□□□ 0.29
PCDH1-201ENST00000287008 ECM29Q5VYK3 1845 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 PRSS37A4D1T9 235 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 BTBD17A6NE02 478 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 OR51E1Q8TCB6 317 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 GPR173Q9NS66 373 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 LOXHD1Q8IVV2 1947 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 LAMA4Q16363 1823 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 A0A1B0GTL3 188 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 MEIOCA2RUB1 952 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 SBK3P0C264 359 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 TPT1P13693 172 aaKnown RBP16.85■□□□□ 0.29
PCDH1-201ENST00000287008 SHBQ15464 509 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 MCM3APO60318 1980 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 M0R1B8 84 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 TNFSF11O14788 317 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 MSTNO14793 375 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 RAF1P04049 648 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 PTGS2P35354 604 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 AADACL4Q5VUY2 407 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 OR52W1Q6IF63 320 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 OVCH1Q7RTY7 1134 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 EGFL6Q8IUX8 553 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 TMEM99Q8N816 258 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 OPALINQ96PE5 141 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 SLC38A1Q9H2H9 487 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 ACOXLQ9NUZ1 547 aa16.85■□□□□ 0.29
PCDH1-201ENST00000287008 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 A6NHS1 94 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 TNFSF12O43508 249 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 TUSC2O75896 110 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 TGM4P49221 684 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 OR4A16Q8NH70 328 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 OR2M2Q96R28 347 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 FAM234AQ9H0X4 552 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 IGHV3-15A0A0B4J1V0 119 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 ATP1B1P05026 303 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 ARRB2P32121 409 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 STEAP1BQ6NZ63 245 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 USP51Q70EK9 711 aa16.84■□□□□ 0.29
PCDH1-201ENST00000287008 FBXL4Q9UKA2 621 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms