RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 HSPB6O14558 160 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 SEMA7AO75326 666 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 ZNF44P15621 663 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 CST5P28325 142 aaPredicted RBP14.29□□□□□ -0.12
USP43-201ENST00000285199 KCNJ3P48549 501 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 HSD11B2P80365 405 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 DCAF12L2Q5VW00 463 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 GVQW1Q8N7I0 195 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 RSC1A1Q92681 617 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 ARHGDIGQ99819 225 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 PPP4R1LQ9P1A2 415 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 LRFN1Q9P244 771 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 ZNF318Q5VUA4 2279 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 A0A0J9YY10 115 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 RAD51DO75771 328 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 RPA2P15927 270 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 MGMTP16455 207 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 ZNF43P17038 809 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 ZNF93P35789 620 aaPredicted RBP14.29□□□□□ -0.12
USP43-201ENST00000285199 GPR85P60893 370 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 SOHLH1Q5JUK2 328 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 RNF165Q6ZSG1 346 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 UBE3DQ7Z6J8 389 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 SYS1Q8N2H4 156 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 STPG2Q8N412 459 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 LRRC18Q8N456 261 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 GLYATL2Q8WU03 294 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 ISOC2Q96AB3 205 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 AKR1E2Q96JD6 320 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 SGCZQ96LD1 299 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 RSRP1Q9BUV0 290 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 TAF9BQ9HBM6 251 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 SMCO4Q9NRQ5 59 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 PCDHGA1Q9Y5H4 931 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 IGHV3-20A0A0C4DH32 117 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 LOC107986453A0A1B0GWG9 222 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 DHRS2Q13268 280 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 OR51A4Q8NGJ6 313 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 GPR137Q96N19 417 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 HIST1H2AAQ96QV6 131 aa14.29□□□□□ -0.12
USP43-201ENST00000285199 MRPS2Q9Y399 296 aaKnown RBP14.29□□□□□ -0.12
USP43-201ENST00000285199 ANKRD31Q8N7Z5 1873 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 TRAV1-2A0A0B4J238 106 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 SULT1C2O00338 296 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 ASCL1P50553 236 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 GLIPR1L1Q6UWM5 242 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 BVESQ8NE79 360 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 SLC2A12Q8TD20 617 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 DCBLD2Q96PD2 775 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 MAP3K3Q99759 626 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 ZNF175Q9Y473 711 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 LOC105371267A0A1B0GV96 52 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 SHOXO15266 292 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 DIRAS3O95661 229 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 NMBP08949 121 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 HNRNPA2B1P22626 353 aaKnown RBP14.28□□□□□ -0.12
USP43-201ENST00000285199 ACSM1Q08AH1 577 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 KIAA0141Q14154 515 aaPredicted RBP14.28□□□□□ -0.12
USP43-201ENST00000285199 ACKR1Q16570 336 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 DEFB133Q30KQ1 61 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 CLEC9AQ6UXN8 241 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 ADAMTSL4Q6UY14 1074 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 Q6ZRG5 221 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 ADGRE4PQ86SQ3 457 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 PIGTQ969N2 578 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 SIGLEC11Q96RL6 698 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 SLC25A32Q9H2D1 315 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 ZNF160Q9HCG1 818 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 OPN4Q9UHM6 478 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 MRPS28Q9Y2Q9 187 aaKnown RBP14.28□□□□□ -0.12
USP43-201ENST00000285199 CACNA1EQ15878 2313 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 ITGB2P05107 769 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 THBS1P07996 1170 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 DBHP09172 617 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 PWWP2BQ6NUJ5 590 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 OR51Q1Q8NH59 317 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 MED29Q9NX70 200 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 PLEK2Q9NYT0 353 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 OR52A1Q9UKL2 312 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 SF3B6Q9Y3B4 125 aaKnown RBP14.28□□□□□ -0.12
USP43-201ENST00000285199 PCYT1BQ9Y5K3 369 aaPredicted RBP14.28□□□□□ -0.12
USP43-201ENST00000285199 CACNA1GO43497 2377 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 APC2O95996 2303 aa14.28□□□□□ -0.12
USP43-201ENST00000285199 XRCC2O43543 280 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 UBE2KP61086 200 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 SCGB1C1Q8TD33 95 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 EXOGQ9Y2C4 368 aaKnown RBP14.27□□□□□ -0.12
USP43-201ENST00000285199 XRCC3O43542 346 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 OR2F2O95006 317 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 UTS2O95399 124 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 LCATP04180 440 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 CA3P07451 260 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 CDKN2AP42771 156 aaKnown RBP14.27□□□□□ -0.12
USP43-201ENST00000285199 OR2F1Q13607 317 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 EIF2S3LQ2VIR3 472 aaKnown RBP14.27□□□□□ -0.12
USP43-201ENST00000285199 EOGTQ5NDL2 527 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 MDGA2Q7Z553 956 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 SERTAD3Q9UJW9 196 aa14.27□□□□□ -0.12
USP43-201ENST00000285199 COL5A3P25940 1745 aaPredicted RBP14.27□□□□□ -0.13
USP43-201ENST00000285199 C7orf66A4D0T2 115 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms