RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PMPCAQ10713 525 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 FAPQ12884 760 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 ABHD12BQ7Z5M8 362 aaPredicted RBP16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 OR10H5Q8NGA6 315 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 OTOSQ8NHW6 89 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 NABP1Q96AH0 204 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 C12orf43Q96C57 262 aaKnown RBP16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 STARD4Q96DR4 205 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 ISG20L2Q9H9L3 353 aaKnown RBP16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 ISYNA1Q9NPH2 558 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 COPS3Q9UNS2 423 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 ZGRF1Q86YA3 2104 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 E9PLN8 166 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 H3BMQ9 156 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 CNOT4O95628 575 aaKnown RBP16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 LALBAP00709 142 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 PSKH1P11801 424 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 NPR2P20594 1047 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 MSR1P21757 451 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 RPS27P42677 84 aaKnown RBP16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 SSX1Q16384 188 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 SGCAQ16586 387 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 TSTQ16762 297 aaKnown RBP16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 BTLAQ7Z6A9 289 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 P2RY8Q86VZ1 359 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 RAB2BQ8WUD1 216 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 SPRYD4Q8WW59 207 aaPredicted RBP16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 FOXB1Q99853 325 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 VKORC1Q9BQB6 163 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 SFXN3Q9BWM7 321 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 TMEM38BQ9NVV0 291 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 LAMP5Q9UJQ1 280 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 TMEM14AQ9Y6G1 99 aa16.64■□□□□ 0.25
PDLIM3-202ENST00000284770 PHF3Q92576 2039 aaKnown RBP16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 SHANK1Q9Y566 2161 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 ARHGAP21Q5T5U3 1957 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 ZNF670-ZNF695F2Z2N8 137 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 TMCC2O75069 709 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 GABARAPO95166 117 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 CGAP01215 116 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 SPARCP09486 303 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 ALOX5APP20292 161 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 CTSSP25774 331 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 CA7P43166 264 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 LSM6P62312 80 aaKnown RBP16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 ACSM1Q08AH1 577 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 CTF1Q16619 201 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 TMPRSS11AQ6ZMR5 421 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 ATCAYQ86WG3 371 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 HTRA1Q92743 480 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 CDADC1Q9BWV3 514 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 SIAEQ9HAT2 523 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 EMC7Q9NPA0 242 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 CYB5R1Q9UHQ9 305 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 KCNG2Q9UJ96 466 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 CACNA1CQ13936 2221 aa16.63■□□□□ 0.25
PDLIM3-202ENST00000284770 TRGV8A0A0C4DH27 118 aa16.62■□□□□ 0.25
PDLIM3-202ENST00000284770 TRIM64BA6NI03 449 aa16.62■□□□□ 0.25
PDLIM3-202ENST00000284770 CCRL2O00421 344 aa16.62■□□□□ 0.25
PDLIM3-202ENST00000284770 NRN1LQ496H8 165 aa16.62■□□□□ 0.25
PDLIM3-202ENST00000284770 FAM27BQ5VT28 67 aa16.62■□□□□ 0.25
PDLIM3-202ENST00000284770 ZNF454Q8N9F8 522 aa16.62■□□□□ 0.25
PDLIM3-202ENST00000284770 PROCRQ9UNN8 238 aa16.62■□□□□ 0.25
PDLIM3-202ENST00000284770 HSPB2A8KAH6 182 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 PHYHO14832 338 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 CD8BP10966 210 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 CPEP16870 476 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 NR4A1P22736 598 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 MPGP29372 298 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 FOXG1P55316 489 aaPredicted RBP16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 TPBGQ13641 420 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 HSPB2Q16082 182 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 CDONQ4KMG0 1287 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 SLC18B1Q6NT16 456 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 Q6ZT83 130 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 ZNF627Q7L945 461 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 SLC22A24Q8N4F4 322 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 THEM6Q8WUY1 208 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 BCL7BQ9BQE9 202 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 ZNF416Q9BWM5 594 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 OSGIN2Q9Y236 505 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 KLHDC2Q9Y2U9 406 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 LHFPL6Q9Y693 200 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 A0A0G2JNJ9 132 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 ATE1O95260 518 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 B4GALT1P15291 398 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 ARF1P84077 181 aaKnown RBP16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 C9orf135Q5VTT2 229 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 TMEM211Q6ICI0 200 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 LINC00346Q8IVM7 164 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 PHC2Q8IXK0 858 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 DMRTA2Q96SC8 542 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 MYCBPQ99417 103 aaPredicted RBP16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 NDUFB11Q9NX14 153 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 BABAM2Q9NXR7 383 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 Q9UFV3 132 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 POLR1DQ9Y2S0 133 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 MEMO1Q9Y316 297 aa16.61■□□□□ 0.25
PDLIM3-202ENST00000284770 FREM1Q5H8C1 2179 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 PRR32B1ATL7 298 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms