RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 AGBL5Q8NDL9 886 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 KCNE4Q8WWG9 221 aa8.05□□□□□ -1.12
NIPBL-201ENST00000282516 BCL2L2Q92843 193 aaPredicted RBP8.05□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF140P52738 457 aaPredicted RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 SLC35D3Q5M8T2 416 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 C11orf40Q8WZ69 217 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 TMIGD2Q96BF3 282 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 DTD2Q96FN9 168 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 TP53BP1Q12888 1972 aaPredicted RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 ST8SIA5O15466 376 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 HCRTO43612 131 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 GTDC1Q4AE62 458 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 OR51H1Q8NH63 302 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 SLC25A43Q8WUT9 341 aaPredicted RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 RPUSD4Q96CM3 377 aaKnown RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 OR2A14Q96R47 310 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CALHM2Q9HA72 323 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CD207Q9UJ71 328 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 DIMT1Q9UNQ2 313 aaKnown RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 YKT6O15498 198 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 DCDP81605 110 aaKnown RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 TPBGQ13641 420 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 OXA1LQ15070 435 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 ABHD4Q8TB40 342 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 RTP4Q96DX8 246 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 HHIPQ96QV1 700 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 ZPBPQ9BS86 351 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CREBZFQ9NS37 354 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CACNA1IQ9P0X4 2223 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 SERINC4A6NH21 518 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 P2RY10O00398 339 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 S100A4P26447 101 aaKnown RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 PRLHRP49683 370 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 MS4A2Q01362 244 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 ZP2Q05996 745 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 DEFB133Q30KQ1 61 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 SMIM21Q3B7S5 101 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 OR2T2Q6IF00 324 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 GSTO2Q9H4Y5 243 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 ARNTLO00327 626 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 SLC6A11P48066 632 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 A0A1W2PPQ1 181 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 TRIM77I1YAP6 450 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CLDN12P56749 244 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 PPP2CAP67775 309 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 VRK2Q86Y07 508 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 APCDD1Q8J025 514 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 UBAC2Q8NBM4 344 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CXorf58Q96LI9 332 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 IL23AQ9NPF7 189 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 DUSP13Q9UII6 198 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 RAB27BO00194 218 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 POU3F3P20264 500 aaPredicted RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CEBPEQ15744 281 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 NXNL2Q5VZ03 156 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CBLL1Q75N03 491 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 TIPARPQ7Z3E1 657 aaKnown RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 NPWQ8N729 165 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 GPX8Q8TED1 209 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 FAM3CQ92520 227 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 TOE1Q96GM8 510 aaKnown RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 ATP5SQ99766 215 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 POLDIP2Q9Y2S7 368 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF407Q9C0G0 2248 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 GCSHP23434 173 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CCR9P51686 369 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 TUSC1Q2TAM9 212 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 MOGAT2Q3SYC2 334 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CYHR1Q6ZMK1 362 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CTU1Q7Z7A3 348 aaKnown RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 TAAR6Q96RI8 345 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 SORBS1Q9BX66 1292 aaKnown RBP8.04□□□□□ -1.12
NIPBL-201ENST00000282516 SLCO3A1Q9UIG8 710 aa8.04□□□□□ -1.12
NIPBL-201ENST00000282516 CACNA1BQ00975 2339 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 UTS2O95399 124 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 FKBP2P26885 142 aaKnown RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 SLC10A2Q12908 348 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 CMTM4Q8IZR5 234 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 C11orf54Q9H0W9 315 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ZNF835Q9Y2P0 537 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 NSG2Q9Y328 171 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 CTDSP2O14595 271 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 CRXO43186 299 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 EDN1P05305 212 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ABCD3P28288 659 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 OR2B8PP59922 312 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 SNRPGP62308 76 aaKnown RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 C17orf67Q0P5P2 114 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ARHGEF39Q8N4T4 335 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 GPR32P1Q8NGA4 272 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 OR52E1Q8NGJ3 308 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 OR5K2Q8NHB8 316 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 C2CD4CQ8TF44 421 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 APOOQ9BUR5 198 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 PCDHGA9Q9Y5G4 932 aaKnown RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 FLVCR1Q9Y5Y0 555 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 RGPD8O14715 1765 aaPredicted RBP8.03□□□□□ -1.12
NIPBL-201ENST00000282516 SCRG1O75711 98 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ALPLP05186 524 aa8.03□□□□□ -1.12
NIPBL-201ENST00000282516 ACHEP22303 614 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms