RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TLCD2A6NGC4 264 aa11.62□□□□□ -0.55
C9orf3-201ENST00000277198 TVP23AA6NH52 213 aa11.62□□□□□ -0.55
C9orf3-201ENST00000277198 ALG1L2C9J202 215 aa11.62□□□□□ -0.55
C9orf3-201ENST00000277198 AKAIN1P0CW23 69 aa11.62□□□□□ -0.55
C9orf3-201ENST00000277198 CALCRP30988 508 aa11.62□□□□□ -0.55
C9orf3-201ENST00000277198 FAM166AQ6J272 317 aa11.62□□□□□ -0.55
C9orf3-201ENST00000277198 KCTD18Q6PI47 426 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-201ENST00000277198 C5orf46Q6UWT4 87 aa11.62□□□□□ -0.55
C9orf3-201ENST00000277198 CDH26Q8IXH8 852 aa11.62□□□□□ -0.55
C9orf3-201ENST00000277198 ZCCHC14Q8WYQ9 949 aaKnown RBP11.62□□□□□ -0.55
C9orf3-201ENST00000277198 SFXN2Q96NB2 322 aa11.62□□□□□ -0.55
C9orf3-201ENST00000277198 CA10Q9NS85 328 aa11.62□□□□□ -0.55
C9orf3-201ENST00000277198 VSX1Q9NZR4 365 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-201ENST00000277198 ZNF107Q9UII5 783 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-201ENST00000277198 TMEM184BQ9Y519 407 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-201ENST00000277198 IGKV3D-11A0A0A0MRZ8 115 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 A0A0A6YYH2 397 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 CIB4A0PJX0 185 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 PRSS37A4D1T9 235 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 OR2W5A6NFC9 320 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 A6NJ64 397 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 PYCARD-AS1I3L0S3 204 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 CFDP00746 253 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-201ENST00000277198 PGCP20142 388 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 KIR3DL2P43630 455 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 MAZP56270 477 aaKnown RBP11.61□□□□□ -0.55
C9orf3-201ENST00000277198 ACTBP60709 375 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 ACTG1P63261 375 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 MFSD13AQ14CX5 517 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 ELAVL1Q15717 326 aaKnown RBP11.61□□□□□ -0.55
C9orf3-201ENST00000277198 RAB11BQ15907 218 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 WDR38Q5JTN6 314 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 KRT77Q7Z794 578 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 GKN2Q86XP6 184 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 ZNF454Q8N9F8 522 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 OR4C16Q8NGL9 310 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 METTL21AQ8WXB1 218 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 ELMOD3Q96FG2 381 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 SLC38A3Q99624 504 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 GINS4Q9BRT9 223 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 CHIAQ9BZP6 476 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 SEMA4CQ9C0C4 833 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 SLCO5A1Q9H2Y9 848 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 NARFLQ9H6Q4 476 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 SCPEP1Q9HB40 452 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 OPN4Q9UHM6 478 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 PPIEQ9UNP9 301 aaKnown RBP11.61□□□□□ -0.55
C9orf3-201ENST00000277198 B9D1Q9UPM9 204 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 COL27A1Q8IZC6 1860 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-201ENST00000277198 A0A087WV48 116 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 A0A1W2PNU3 283 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-201ENST00000277198 MEGF11A6BM72 1044 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 SLC25A12O75746 678 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 MT-CO3P00414 261 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 IGHMP01871 453 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 CD2P06729 351 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 CXCL2P19875 107 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 FSTP19883 344 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 PRSS3P35030 304 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 POU3F4P49335 361 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 CAPZA1P52907 286 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 GMFBP60983 142 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 RPL27P61353 136 aaKnown RBP11.61□□□□□ -0.55
C9orf3-201ENST00000277198 SEC61A1P61619 476 aaKnown RBP11.61□□□□□ -0.55
C9orf3-201ENST00000277198 ZNF117Q03924 483 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 GLT8D1Q68CQ7 371 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 C17orf82Q86X59 251 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-201ENST00000277198 PM20D2Q8IYS1 436 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 CARFQ8N187 725 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 ZNF721Q8TF20 911 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 TSEN15Q8WW01 171 aaKnown RBP11.61□□□□□ -0.55
C9orf3-201ENST00000277198 FAM3DQ96BQ1 224 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 ADOQ96SZ5 270 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 ELOVL3Q9HB03 270 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 PNO1Q9NRX1 252 aaKnown RBP11.61□□□□□ -0.55
C9orf3-201ENST00000277198 UPB1Q9UBR1 384 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 CKLFQ9UBR5 152 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 NUP210LQ5VU65 1888 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 NBEAQ8NFP9 2946 aa11.61□□□□□ -0.55
C9orf3-201ENST00000277198 H7C1C5 153 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 HCRTR2O43614 444 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 NPIPB7O75200 414 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 B3GALNT1O75752 331 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 DXOO77932 396 aaKnown RBP11.6□□□□□ -0.55
C9orf3-201ENST00000277198 TMIGD3P0DMS9 266 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-201ENST00000277198 ENPP1P22413 925 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 IL12BP29460 328 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 S100A11P31949 105 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 LCN6P62502 163 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 MEP1BQ16820 701 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 CDCP2Q5VXM1 449 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 GPAT4Q86UL3 456 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 KDF1Q8NAX2 398 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-201ENST00000277198 CLEC1AQ8NC01 280 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 OR51D1Q8NGF3 324 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 OR51A4Q8NGJ6 313 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 ZNF519Q8TB69 540 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 GPX8Q8TED1 209 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 CCDC107Q8WV48 283 aa11.6□□□□□ -0.55
C9orf3-201ENST00000277198 RBPMSQ93062 196 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms