RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SPATS1Q496A3 300 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 ELFN2Q5R3F8 820 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 CYB5R2Q6BCY4 276 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 ZNF774Q6NX45 483 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 ZDHHC21Q8IVQ6 265 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 ZNF786Q8N393 782 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 ICA1LQ8NDH6 482 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 OR1J2Q8NGS2 313 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 UBASH3BQ8TF42 649 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 SYT4Q9H2B2 425 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 FAM53CQ9NYF3 392 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 ACTR3BQ9P1U1 418 aa12.35□□□□□ -0.43
HMGN3-201ENST00000275036 A0A1W2PPW3 197 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 TCRBV5S2A0A599 114 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 C5orf49A4QMS7 147 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 SOCS2O14508 198 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 AHCYL1O43865 530 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 LILRA1O75019 489 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 MPZL1O95297 269 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 TXNDC12O95881 172 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 ERCC1P07992 297 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-201ENST00000275036 ZNF23P17027 643 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 CDKN2AP42771 156 aaKnown RBP12.34□□□□□ -0.43
HMGN3-201ENST00000275036 RAD52P43351 418 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 MNAT1P51948 309 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 SMIM11AP58511 58 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 RIN1Q13671 783 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 TRIP10Q15642 601 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 CHRFAM7AQ494W8 412 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 GPR139Q6DWJ6 353 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 SMARCD3Q6STE5 483 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 DPY19L2P2Q6ZN68 376 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 IL17RELQ6ZVW7 336 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 CCDC197Q8NCU1 140 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 SYNPRQ8TBG9 265 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 FANK1Q8TC84 345 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 GTF3AQ92664 365 aaKnown RBP12.34□□□□□ -0.43
HMGN3-201ENST00000275036 MCUR1Q96AQ8 359 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 BCL2L14Q9BZR8 327 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 LRMDAQ9H2I8 198 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 MS4A5Q9H3V2 200 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 TMEM160Q9NX00 188 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 VSX1Q9NZR4 365 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-201ENST00000275036 TAAR3PQ9P1P4 343 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 COA3Q9Y2R0 106 aaPredicted RBP12.34□□□□□ -0.43
HMGN3-201ENST00000275036 TIMM10BQ9Y5J6 103 aa12.34□□□□□ -0.43
HMGN3-201ENST00000275036 TANC2Q9HCD6 1990 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 DCTN6O00399 190 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 OR10H3O60404 316 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 SLC16A7O60669 478 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 PPP1R3DO95685 299 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 GPANK1O95872 356 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 APEHP13798 732 aaKnown RBP12.33□□□□□ -0.44
HMGN3-201ENST00000275036 COL8A2P25067 703 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 FPR3P25089 353 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 MPV17P39210 176 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 GUCA1AP43080 201 aaPredicted RBP12.33□□□□□ -0.44
HMGN3-201ENST00000275036 MAGEB1P43366 347 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 GSSP48637 474 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 GDI2P50395 445 aaKnown RBP12.33□□□□□ -0.44
HMGN3-201ENST00000275036 KLF3P57682 345 aaPredicted RBP12.33□□□□□ -0.44
HMGN3-201ENST00000275036 MS4A2Q01362 244 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 RFX4Q33E94 735 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 SPATA46Q5T0L3 261 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 RFPL4BQ6ZWI9 263 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 CXXC5Q7LFL8 322 aaKnown RBP12.33□□□□□ -0.44
HMGN3-201ENST00000275036 OR1J1Q8NGS3 322 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 C11orf40Q8WZ69 217 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 YIPF5Q969M3 257 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 MARS2Q96GW9 593 aaKnown RBP12.33□□□□□ -0.44
HMGN3-201ENST00000275036 TSSK2Q96PF2 358 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 NDEL1Q9GZM8 345 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 NUAK2Q9H093 628 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 OR52D1Q9H346 318 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 KRCC1Q9NPI7 259 aaPredicted RBP12.33□□□□□ -0.44
HMGN3-201ENST00000275036 LYVE1Q9Y5Y7 322 aa12.33□□□□□ -0.44
HMGN3-201ENST00000275036 C12orf71A8MTZ7 269 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 LMX1BO60663 402 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 NGFP01138 241 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 TACSTD2P09758 323 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 CALB2P22676 271 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 MAGEA2P43356 314 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 GZMKP49863 264 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 RPS6KA3P51812 740 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 PCBD1P61457 104 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 GLO1Q04760 184 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 PPP1R8Q12972 351 aaKnown RBP12.32□□□□□ -0.44
HMGN3-201ENST00000275036 NKPD1Q17RQ9 610 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 LCN8Q6JVE9 175 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 C1orf94Q6P1W5 598 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 PGBD2Q6P3X8 592 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 SYT9Q86SS6 491 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 ADCK1Q86TW2 530 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 ALDH16A1Q8IZ83 802 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 SLC25A40Q8TBP6 338 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 IPCEF1Q8WWN9 437 aaPredicted RBP12.32□□□□□ -0.44
HMGN3-201ENST00000275036 SAMD8Q96LT4 415 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 ERMAPQ96PL5 475 aaPredicted RBP12.32□□□□□ -0.44
HMGN3-201ENST00000275036 BTBD10Q9BSF8 475 aa12.32□□□□□ -0.44
HMGN3-201ENST00000275036 RERGLQ9H628 205 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms