RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 LPLP06858 475 aa12.44□□□□□ -0.42
NPC1-201ENST00000269228 CPT2P23786 658 aa12.44□□□□□ -0.42
NPC1-201ENST00000269228 TMEM81Q6P7N7 255 aa12.44□□□□□ -0.42
NPC1-201ENST00000269228 TRILQ7L0X0 811 aa12.44□□□□□ -0.42
NPC1-201ENST00000269228 DOK3Q7L591 496 aa12.44□□□□□ -0.42
NPC1-201ENST00000269228 D2HGDHQ8N465 521 aa12.44□□□□□ -0.42
NPC1-201ENST00000269228 OR6M1Q8NGM8 313 aa12.44□□□□□ -0.42
NPC1-201ENST00000269228 PHYHIPQ92561 330 aa12.44□□□□□ -0.42
NPC1-201ENST00000269228 ZNF799Q96GE5 643 aa12.44□□□□□ -0.42
NPC1-201ENST00000269228 LRFN5Q96NI6 719 aa12.44□□□□□ -0.42
NPC1-201ENST00000269228 GPR173Q9NS66 373 aa12.44□□□□□ -0.42
NPC1-201ENST00000269228 TRGV5A0A0B4J1U4 118 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 FUOMA2VDF0 154 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 M0R036 132 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 PEX14O75381 377 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 TFP02787 698 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 B4GALT1P15291 398 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 ACHEP22303 614 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 CYCSP99999 105 aaKnown RBP12.43□□□□□ -0.42
NPC1-201ENST00000269228 CT55Q8WUE5 264 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 STEAP1Q9UHE8 339 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 PCDHGA5Q9Y5G8 931 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 FAM186AA6NE01 2351 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 C5orf49A4QMS7 147 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 ARRDC5A6NEK1 342 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 DHHO43323 396 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 AVPR2P30518 371 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 RPL19P84098 196 aaKnown RBP12.43□□□□□ -0.42
NPC1-201ENST00000269228 WFDC8Q8IUA0 241 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 NKAIN3Q8N8D7 197 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 STOML3Q8TAV4 291 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 FNDC9Q8TBE3 224 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 GVINP1Q7Z2Y8 2422 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 CD300LBA8K4G0 201 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 SOD1P00441 154 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 APEX1P27695 318 aaKnown RBP12.43□□□□□ -0.42
NPC1-201ENST00000269228 SYT9Q86SS6 491 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 RDH10Q8IZV5 341 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 LILRB2Q8N423 598 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 BEST4Q8NFU0 473 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 ALKBH3Q96Q83 286 aaPredicted RBP12.43□□□□□ -0.42
NPC1-201ENST00000269228 TMEM246Q9BRR3 403 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 PPA2Q9H2U2 334 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 OR51J1Q9H342 316 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 PRAF2O60831 178 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 GABARAPO95166 117 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 SERPINA7P05543 415 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 TAS2R46P59540 309 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 GFRALQ6UXV0 394 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 DNAJC5GQ8N7S2 189 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 B3GAT1Q9P2W7 334 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 KCNG2Q9UJ96 466 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 LTBP1Q14766 1721 aa12.43□□□□□ -0.42
NPC1-201ENST00000269228 IGHV5-10-1A0A0J9YXX1 117 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 F5H5P2 479 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 ZNF254O75437 659 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 CLDN6P56747 220 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 EDDM3BP56851 147 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 RELAQ04206 551 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 MYBPHQ13203 477 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 ADPRMQ3LIE5 342 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 USP51Q70EK9 711 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 FAM83FQ8NEG4 500 aaPredicted RBP12.42□□□□□ -0.42
NPC1-201ENST00000269228 ZFAND1Q8TCF1 268 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 MED18Q9BUE0 208 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 A0A0B4J2E0 115 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 A0A1B0GX12 115 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 CRYAAP02489 173 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 ADH6P28332 368 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 PLA2G12AQ9BZM1 189 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 ANKRD61A6NGH8 418 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 NAGAP17050 411 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 GDNFP39905 211 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 RGS19P49795 217 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 ZNF74Q16587 644 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 C3orf49Q96BT1 292 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 ERVMER34-1Q9H9K5 563 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 ZFP57Q9NU63 452 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 TAS2R4Q9NYW5 299 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 FBXO4Q9UKT5 387 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 A0A1W2PS29 197 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 CRYABP02511 175 aaKnown RBP12.42□□□□□ -0.42
NPC1-201ENST00000269228 ARR3P36575 388 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 SNRPD2P62316 118 aaKnown RBP12.42□□□□□ -0.42
NPC1-201ENST00000269228 COMTD1Q86VU5 262 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 ZNF679Q8IYX0 411 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 GALNT16Q8N428 558 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 GPR32P1Q8NGA4 272 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 OR2Y1Q8NGV0 311 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 H1FXQ92522 213 aaKnown RBP12.42□□□□□ -0.42
NPC1-201ENST00000269228 CPNE4Q96A23 557 aaPredicted RBP12.42□□□□□ -0.42
NPC1-201ENST00000269228 PLCXD1Q9NUJ7 323 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 UFSP2Q9NUQ7 469 aa12.42□□□□□ -0.42
NPC1-201ENST00000269228 TEX51A0A1B0GUA7 166 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 ARPC5O15511 151 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 PDGFBP01127 241 aaPredicted RBP12.41□□□□□ -0.42
NPC1-201ENST00000269228 FAM157BP0CG42 384 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 MEOX1P50221 254 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 UBE3DQ7Z6J8 389 aa12.41□□□□□ -0.42
NPC1-201ENST00000269228 ADGRE4PQ86SQ3 457 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms