RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MSRB2Q9Y3D2 182 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 TRGV5A0A0B4J1U4 118 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 IQCMA0A1B0GVH7 501 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 CLDN25C9JDP6 229 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 IGHG3P01860 377 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 CPN1P15169 458 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 CDAP32320 146 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 CCR9P51686 369 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 SRYQ05066 204 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 DCTN2Q13561 401 aaKnown RBP14.49□□□□□ -0.09
TPM1-201ENST00000267996 YIF1BQ5BJH7 314 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 KRT77Q7Z794 578 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 LINC00346Q8IVM7 164 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 DCBLD2Q96PD2 775 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 TPK1Q9H3S4 243 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 SEC61A2Q9H9S3 476 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 PLEKHB1Q9UF11 243 aaPredicted RBP14.49□□□□□ -0.09
TPM1-201ENST00000267996 PCDHGA9Q9Y5G4 932 aaKnown RBP14.49□□□□□ -0.09
TPM1-201ENST00000267996 LHFPL6Q9Y693 200 aa14.49□□□□□ -0.09
TPM1-201ENST00000267996 APC2O95996 2303 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 CASKO14936 926 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 DHHO43323 396 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 SLC43A1O75387 559 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 SRSF10O75494 262 aaKnown RBP14.48□□□□□ -0.09
TPM1-201ENST00000267996 UCHL1P09936 223 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 BMP4P12644 408 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 RIDAP52758 137 aaKnown RBP14.48□□□□□ -0.09
TPM1-201ENST00000267996 LSM6P62312 80 aaKnown RBP14.48□□□□□ -0.09
TPM1-201ENST00000267996 PMP22Q01453 160 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 HNRNPA0Q13151 305 aaKnown RBP14.48□□□□□ -0.09
TPM1-201ENST00000267996 FAM27D1Q5T7N8 215 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 AAED1Q7RTV5 226 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 PRSS35Q8N3Z0 413 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 ABHD3Q8WU67 409 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 C6orf62Q9GZU0 229 aaPredicted RBP14.48□□□□□ -0.09
TPM1-201ENST00000267996 RNF122Q9H9V4 155 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 EMC7Q9NPA0 242 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 SPRR3Q9UBC9 169 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 CRNNQ9UBG3 495 aaPredicted RBP14.48□□□□□ -0.09
TPM1-201ENST00000267996 LRP12Q9Y561 859 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 PEX16Q9Y5Y5 336 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 ASPMQ8IZT6 3477 aa14.48□□□□□ -0.09
TPM1-201ENST00000267996 DCHS1Q96JQ0 3298 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 TRAV1-2A0A0B4J238 106 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 A0A1B0GTH9 108 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 TMEM212A6NML5 194 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 SYNGR4O95473 234 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 CALRP27797 417 aaKnown RBP14.47□□□□□ -0.09
TPM1-201ENST00000267996 KIR3DL2P43630 455 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 ZNF846Q147U1 533 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 CORO6Q6QEF8 472 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 RHOUQ7L0Q8 258 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 OR5AK2Q8NH90 309 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 BORCS5Q969J3 196 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 ZNF775Q96BV0 537 aaPredicted RBP14.47□□□□□ -0.09
TPM1-201ENST00000267996 WDYHV1Q96HA8 205 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 ULBP2Q9BZM5 246 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 C1orf198Q9H425 327 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 LDAHQ9H6V9 325 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 HMG20AQ9NP66 347 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 MCTS1Q9ULC4 181 aaKnown RBP14.47□□□□□ -0.09
TPM1-201ENST00000267996 PHF3Q92576 2039 aaKnown RBP14.47□□□□□ -0.09
TPM1-201ENST00000267996 LOC400499M0QZD8 3231 aa14.47□□□□□ -0.09
TPM1-201ENST00000267996 ZFHX4Q86UP3 3567 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 A0A087WV48 116 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 TRBV5-5A0A0J9YX44 114 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 GPR171O14626 319 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 PNPP00491 289 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 DCTDP32321 178 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 WDR38Q5JTN6 314 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 RIPPLY2Q5TAB7 128 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 OR7E24Q6IFN5 339 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 TPRA1Q86W33 373 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 ZADH2Q8N4Q0 377 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 IL17RDQ8NFM7 739 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 OR10S1Q8NGN2 331 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 NABP1Q96AH0 204 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 SLAMF6Q96DU3 332 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 KCNS3Q9BQ31 491 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 WDR12Q9GZL7 423 aaKnown RBP14.46□□□□□ -0.09
TPM1-201ENST00000267996 SMURF1Q9HCE7 757 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 GDF2Q9UK05 429 aaPredicted RBP14.46□□□□□ -0.09
TPM1-201ENST00000267996 R4GMQ9 66 aa14.46□□□□□ -0.09
TPM1-201ENST00000267996 TNRC6AQ8NDV7 1962 aaKnown RBP14.46□□□□□ -0.1
TPM1-201ENST00000267996 ARPC4-TTLL3A0A0A6YYG9 625 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 A0A1B0GVC2 190 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 ZNF879B4DU55 563 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 CTDSP2O14595 271 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 TFECO14948 347 aaPredicted RBP14.46□□□□□ -0.1
TPM1-201ENST00000267996 ARL6IP5O75915 188 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 ZNF24P17028 368 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 MSR1P21757 451 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 ETV6P41212 452 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 CFAP77Q6ZQR2 320 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 SPATC1Q76KD6 591 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 CATSPERDQ86XM0 798 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 OR14A2Q96R54 314 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 NELFAQ9H3P2 528 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 BCO1Q9HAY6 547 aa14.46□□□□□ -0.1
TPM1-201ENST00000267996 DKK4Q9UBT3 224 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms