RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 C5orf49A4QMS7 147 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 A6NIZ1 184 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 EFCAB9A8MZ26 197 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 FAM157AC9JC47 383 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 CXCR6O00574 342 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 NME4O00746 187 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 PPIHO43447 177 aaKnown RBP8.29□□□□□ -1.08
VPS41-201ENST00000265745 CDC14BO60729 498 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 CCDC22O60826 627 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 PRSS23O95084 383 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 ZNF682O95780 498 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 CST2P09228 141 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 SAGP10523 405 aaPredicted RBP8.29□□□□□ -1.08
VPS41-201ENST00000265745 COX4I1P13073 169 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 CCNOP22674 350 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 LAP3P28838 519 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 CRYBB2P43320 205 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 GDI2P50395 445 aaKnown RBP8.29□□□□□ -1.08
VPS41-201ENST00000265745 SLC7A2P52569 658 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 RAP1BP61224 184 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 LMO4P61968 165 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 RAP1AP62834 184 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 ERVK-25P63136 954 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 ANKDD1AQ495B1 522 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 TBPL2Q6SJ96 375 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 FOXL2NBQ6ZUU3 175 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 FKBP9P1Q75LS8 142 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 CBLL1Q75N03 491 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 TSEN54Q7Z6J9 526 aaKnown RBP8.29□□□□□ -1.08
VPS41-201ENST00000265745 OAFQ86UD1 273 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 IGFN1Q86VF2 1251 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 ZNF101Q8IZC7 436 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 FAM156AQ8NDB6 213 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 ICA1LQ8NDH6 482 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 OR1J1Q8NGS3 322 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 AKR7LQ8NHP1 331 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 SNX33Q8WV41 574 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 GEMIN6Q8WXD5 167 aaKnown RBP8.29□□□□□ -1.08
VPS41-201ENST00000265745 ACOT11Q8WXI4 607 aaPredicted RBP8.29□□□□□ -1.08
VPS41-201ENST00000265745 GTF3AQ92664 365 aaKnown RBP8.29□□□□□ -1.08
VPS41-201ENST00000265745 MARS2Q96GW9 593 aaKnown RBP8.29□□□□□ -1.08
VPS41-201ENST00000265745 OR2H1Q9GZK4 316 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 WNT5BQ9H1J7 359 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 NARFLQ9H6Q4 476 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 EFCAB1Q9HAE3 211 aa8.29□□□□□ -1.08
VPS41-201ENST00000265745 EIF3KQ9UBQ5 218 aaKnown RBP8.29□□□□□ -1.08
VPS41-201ENST00000265745 CDC42EP2O14613 210 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 GSTA4O15217 222 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 HTR3BO95264 441 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 SERPINA1P01009 418 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 TFP02787 698 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 SCG5P05408 212 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 GAAP10253 952 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 ZNF26P17031 533 aaPredicted RBP8.28□□□□□ -1.08
VPS41-201ENST00000265745 DRD4P21917 467 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 PCMT1P22061 227 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 SRP14P37108 136 aaKnown RBP8.28□□□□□ -1.08
VPS41-201ENST00000265745 MDH1P40925 334 aaKnown RBP8.28□□□□□ -1.08
VPS41-201ENST00000265745 GUCA1AP43080 201 aaPredicted RBP8.28□□□□□ -1.08
VPS41-201ENST00000265745 MAP2K3P46734 347 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 SLC9A3P48764 834 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 GSK3BP49841 420 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 MMP15P51511 669 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 PCBD1P61457 104 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 ENDOGQ14249 297 aaKnown RBP8.28□□□□□ -1.08
VPS41-201ENST00000265745 ZNF718Q3SXZ3 478 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 IFI44LQ53G44 452 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 TMEM255AQ5JRV8 349 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 LIPNQ5VXI9 398 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 MBNL2Q5VZF2 373 aaKnown RBP8.28□□□□□ -1.08
VPS41-201ENST00000265745 UNQ6126/PRO20091Q6UXV3 157 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 HACD2Q6Y1H2 254 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 ZNF730Q6ZMV8 503 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 TMPRSS11FQ6ZWK6 438 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 MBOAT2Q6ZWT7 520 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 GLCCI1Q86VQ1 547 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 C1orf174Q8IYL3 243 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 RFLNBQ8N5W9 214 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 OR13C2Q8NGS9 318 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 TMEM186Q96B77 213 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 C19orf24Q9BVV8 132 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 NMNAT1Q9HAN9 279 aaPredicted RBP8.28□□□□□ -1.08
VPS41-201ENST00000265745 HIF1ANQ9NWT6 349 aa8.28□□□□□ -1.08
VPS41-201ENST00000265745 hCG_2014768A0A024R1R8 64 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 IGHV1-69-2A0A0G2JMI3 117 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 A0A1W2PRQ8 180 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 C12orf71A8MTZ7 269 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 B2RBV5 119 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 NDUFAB1O14561 156 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 AHCYL1O43865 530 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 PTP4A3O75365 173 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 NGFP01138 241 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 IGHV1-46P01743 117 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 MT-ND5P03915 603 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 MSMBP08118 114 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 CD14P08571 375 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 MSR1P21757 451 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 GCH1P30793 250 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 MPV17P39210 176 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 GPR4P46093 362 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms