RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SLC35D3Q5M8T2 416 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 MED27Q6P2C8 311 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 KCTD9Q7L273 389 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 DND1Q8IYX4 353 aaKnown RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 HIST3H2BBQ8N257 126 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 BPIFB2Q8N4F0 458 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 INO80EQ8NBZ0 244 aaPredicted RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 OR56B1Q8NGI3 324 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HIST1H2BHQ93079 126 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 RNF166Q96A37 237 aaPredicted RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 MRGPRFQ96AM1 343 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 MIB2Q96AX9 1013 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 TIFAQ96CG3 184 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 ALG14Q96F25 216 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 CYYR1Q96J86 154 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HIST1H2BNQ99877 126 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HIST1H2BMQ99879 126 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 OR51B4Q9Y5P0 310 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 V9GY05 133 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 PTPRSQ13332 1948 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 TRAV8-7A0A075B6U6 113 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 TRAV18A0A075B6X5 111 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 TRAV27A0A087WT01 109 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 MFNGO00587 321 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 ATXN7O15265 892 aaPredicted RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 CYTIPO60759 359 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 STATHP02808 62 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 MAS1P04201 325 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 DCNP07585 359 aaKnown RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 TPT1P13693 172 aaKnown RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 ZNF28P17035 718 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 SLC2A5P22732 501 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 CRABP1P29762 137 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 RPS23P62266 143 aaKnown RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 DUSP2Q05923 314 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 PPP1R1AQ13522 171 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 NKPD1Q17RQ9 610 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 PRAMEF17Q5VTA0 474 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 STEAP1BQ6NZ63 245 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HEPN1Q6WQI6 88 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 CLEC1AQ8NC01 280 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 CASTOR1Q8WTX7 329 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 TFGQ92734 400 aaPredicted RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 BSCL2Q96G97 398 aaPredicted RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 METTL9Q9H1A3 318 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 VSX1Q9NZR4 365 aaPredicted RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 SLC7A7Q9UM01 511 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 FARSAQ9Y285 508 aaKnown RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 VPS13AQ96RL7 3174 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 C13orf42A0A1B0GVH6 325 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 ARL6IP5O75915 188 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 PMS2P2O95744 297 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 RAB6AP20340 208 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 SLC26A5P58743 744 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 SIRPAP78324 504 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 LTBQ06643 244 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 LASP1Q14847 261 aaKnown RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 BTNL8Q6UX41 500 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 NAXEQ8NCW5 288 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 OR4S1Q8NGB4 309 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 OR4K17Q8NGC6 315 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 OR13C8Q8NGS7 320 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 OR13C2Q8NGS9 318 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 OR10AC1Q8NH08 325 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 MALSU1Q96EH3 234 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 SMIM8Q96KF7 97 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 CST11Q9H112 138 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 ZDHHC3Q9NYG2 299 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 OR5AC2Q9NZP5 309 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 P2RX2Q9UBL9 471 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HDGFL3Q9Y3E1 203 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 TMEM184BQ9Y519 407 aaPredicted RBP7.94□□□□□ -1.14
VAPB-201ENST00000265619 MTCL1Q9Y4B5 1905 aaKnown RBP7.93□□□□□ -1.14
VAPB-201ENST00000265619 C4orf47A7E2U8 309 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 PLPP1O14494 284 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 XRCC3O43542 346 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 FCMRO60667 390 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 RAMP1O60894 148 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 FBXO24O75426 580 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 ELFN1P0C7U0 828 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 AKAIN1P0CW23 69 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 THEGLP0DJG4 465 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 RNH1P13489 461 aaKnown RBP7.93□□□□□ -1.14
VAPB-201ENST00000265619 RPS2P15880 293 aaKnown RBP7.93□□□□□ -1.14
VAPB-201ENST00000265619 CSRP1P21291 193 aaKnown RBP7.93□□□□□ -1.14
VAPB-201ENST00000265619 IL2RGP31785 369 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 NHLH2Q02577 135 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 OR4C11Q6IEV9 310 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 UNQ9370/PRO34162Q6UXP9 181 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 STAC2Q6ZMT1 411 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 HIST2H3AQ71DI3 136 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 TMPRSS12Q86WS5 348 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 GID4Q8IVV7 300 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 SLC35F3Q8IY50 421 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 EID2Q8N6I1 236 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 OR51D1Q8NGF3 324 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 OR56A3Q8NH54 315 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 GAL3ST3Q96A11 431 aa7.93□□□□□ -1.14
VAPB-201ENST00000265619 CDCA3Q99618 268 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms